Erwinia rhapontici: LJN55_15165
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Entry
LJN55_15165 CDS
T08392
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
erp
Erwinia rhapontici
Pathway
erp00521
Streptomycin biosynthesis
erp00523
Polyketide sugar unit biosynthesis
erp00541
Biosynthesis of various nucleotide sugars
erp01100
Metabolic pathways
erp01110
Biosynthesis of secondary metabolites
erp01250
Biosynthesis of nucleotide sugars
Module
erp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LJN55_15165 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LJN55_15165 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LJN55_15165 (rfbC)
Enzymes [BR:
erp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LJN55_15165 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UDQ78800
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Position
complement(3240911..3241450)
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AA seq
179 aa
AA seq
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MNVIRTEIPDVLIFEPKVFGDERGFFFESFSQKVFEEAVGRKVEFVQDNHSKSSKGVLRG
LHYQVAPHAQGKLVRCVVGDIFDVAVDIRSDSPTYGQWVGVKLSAENKKQLWIPEGFAHG
FIALTEGVEILYKTNNLYNKESERSIKWDDPDLNIGWPVNASCISEKDQQASAFKDILM
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgattagaacagaaataccggatgtgctgatttttgagcctaaagtgttcggg
gatgaacgaggtttcttttttgagagcttcagccagaaagtatttgaagaagcagtaggc
cgtaaggtggagtttgtgcaggataaccattcgaagtcttcaaaaggggttcttcgcggt
ttgcattaccaggttgcgcctcatgcgcaggggaagttggtacgttgtgttgttggtgat
attttcgatgttgcggtagatatacgttctgattctccaacttatgggcaatgggtgggt
gttaagttatccgcagagaataaaaaacagctttggataccagaaggttttgcccatggc
tttattgcacttacagaaggtgtggaaattctatataaaaccaacaacctttataacaaa
gaatctgaacgttcaattaaatgggatgatcccgatttaaatattggatggccagttaac
gcctcttgcatttctgagaaagatcaacaagcttcagcgttcaaagatatattaatgtaa
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