Erwinia rhapontici: LJN55_15820
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Entry
LJN55_15820 CDS
T08392
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erp03032
]
LJN55_15820 (gyrA)
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_15820 (gyrA)
Enzymes [BR:
erp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LJN55_15820 (gyrA)
DNA replication proteins [BR:
erp03032
]
Prokaryotic type
DNA Topoisomerases
LJN55_15820 (gyrA)
DNA repair and recombination proteins [BR:
erp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LJN55_15820 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CTD9
Motif
Other DBs
NCBI-ProteinID:
UDQ78925
LinkDB
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Position
complement(3413880..3416516)
Genome browser
AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKDTVDFVPNYDGTEQIPEVMPTRVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDENITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARGEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMPLKDILEAFVRHRRE
VITRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAASPSEAKAGLIARPWALGNV
SAMLERAGDNAARPEWLEDEFGIRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLRILGSSERLMEVIREELELIRDQFGDERRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYAEGFNIFMATASGTVKKTAL
KEFSRPRSAGIIAVNLRDDDELIGVSLTNGSDEAMLFSAAGKVVRFAESAVRAMGRTASG
VRGIKLAEGDRVVSLIVPRDDGAILTVTQNGYGKRTANTEYPTKSRATQGVISIKVTERN
GPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAEDENVVGLQRVA
EPVAEDELDAIDGSVAEGDDDIAPEVESDDDAPEADDE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctggcccgcgaaattacaccggtcaatatcgaagaagagttaaagaactcc
tatctggattatgcaatgtcggtcatcgttggccgtgcgctgccagatgtccgtgatggc
ctgaagccggttcaccgccgcgtgctttacgctatgaacgtcctcggtaacgactggaac
aaagcttataaaaaatccgcccgtgtcgtcggtgacgtcatcggtaaatatcaccctcat
ggcgacactgccgtgtatgacaccatcgtgcgtatggcgcagccgttctcgctgcgttac
atgctggtggacggtcagggcaacttcggctccgtagatggcgactccgctgctgcgatg
cgttataccgaagttcgcatgtccaaaatcgctcacgaactgttggcggatctggaaaaa
gacaccgttgactttgtgcctaactacgatggcaccgagcagatcccggaagtgatgccg
acccgcgttcccaacctgctggttaacggttcctcagggattgccgtcgggatggccacg
aacattcctccacataacctgaccgaagtgatcaacggctgcctggcctatatcgacgac
gaaaacattaccgtcgaagggctgatggaacacatcccaggcccggacttcccgaccgcc
gctatcatcaatggccgccgtggcattgaagaagcttatcgcactggccgtggaaaaatt
tacatccgcgcccgtggtgaagtggaagtggatgcgaagaccggccgtgaaaccatcatc
gtgcatgaaattccgtatcaggtgaacaaagcgcgcctgattgagaaaattgccgagctg
gtaaaagaaaaacgtctggaaggcatcagcgccctgcgcgatgagtctgacaaagacggt
atgcgcatcgtgatcgaagtgaagcgcgatgcggttggcgaagtggttctgaacaatctg
tattcactgactcagcttcagacctctttcggcatcaacatggtggcactgcaccagggc
cagccaaagattatgccgctgaaggatattcttgaagccttcgtgcgtcaccgtcgtgaa
gtgattacccgccgtaccattttcgaactgcgtaaagcgcgtgaccgtgctcatatcctt
gaagcactggccgtagcgctggcgaacatcgatccgattattgagctgatccgccgcgct
gcttctccttctgaagcgaaagcgggcctgattgcgcgtccatgggcgctgggtaacgtc
tccgcgatgctggaacgtgccggtgataatgcagcgcgccctgagtggctggaagatgag
ttcggtatccgcgatggtcagtactatctgactgagcagcaggctcaggcgatccttgat
ttacgcctgcagaaactgaccggacttgagcatgaaaaactgctcgacgagtacaaagag
ctgctggagcagatcgcagagctgttacgcattctgggtagttccgagcgtctgatggaa
gtgattcgcgaagagctggagctgatccgcgatcagttcggcgatgagcgtcgtaccgaa
atcaccgctaacagcgccgacatcaacatcgaagacctgatcaaccaggaagatgttgtg
gtgaccctgtcgcatcagggctacgtgaagtatcagccattgactgattacgaagcgcag
cgccgtggtggtaaaggtaaatcggctgcacgcattaaagaagaagactttatcgaccgc
ctgctggtggccaacacccatgacaccatcctctgcttctcaagccgtggtcgtctgtac
tggatgaaggtttatcagctgccggaagccagccgtggtgcgcgtgggcgtccaatcgtc
aacctgttaccgctggaagccaacgaacgtatcaccgcaatcctgccggtgcgtgagtat
gcagaaggctttaacatctttatggcgaccgccagcggtaccgtgaagaaaacggccctg
aaagagttcagccgcccacgcagcgccggtatcattgccgtcaacctgcgtgacgacgac
gaactgattggtgtgtcactgaccaacggtagcgatgaagcgatgctgttctctgccgcc
ggtaaagtggtgcgcttcgcagaaagcgctgttcgtgcgatgggtcgtactgcctctggc
gtgcgcggtatcaaactggcagaaggcgatcgcgtggtgtcactgattgtaccgcgtgac
gatggtgccatcctgaccgtgacacagaacggttatggtaagcgtacggcgaacaccgag
tatccaaccaagtcgcgtgcgacgcagggtgtgatctcgattaaagtgaccgaacgtaat
ggaccggttattggtgcggtacaggttgtcgacagcgatcagattatgatgatcaccgat
gccggtacgctggtgcgtacccgcgtgtctgaagtgagcgtagtagggcgtaacacccag
ggtgttatccttattcgtaccgctgaagatgaaaacgtggtgggtctgcaacgtgtggcc
gaaccggtagcggaagatgaacttgatgctatcgacggcagcgtcgcggaaggggatgac
gatattgccccggaagtggaaagcgacgacgatgcacctgaggccgatgacgagtaa
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