Erwinia rhapontici: LJN55_16410
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Entry
LJN55_16410 CDS
T08392
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
erp
Erwinia rhapontici
Pathway
erp00071
Fatty acid degradation
erp00280
Valine, leucine and isoleucine degradation
erp00310
Lysine degradation
erp00362
Benzoate degradation
erp00380
Tryptophan metabolism
erp00410
beta-Alanine metabolism
erp00640
Propanoate metabolism
erp00650
Butanoate metabolism
erp00907
Pinene, camphor and geraniol degradation
erp00930
Caprolactam degradation
erp01100
Metabolic pathways
erp01110
Biosynthesis of secondary metabolites
erp01120
Microbial metabolism in diverse environments
erp01200
Carbon metabolism
erp01212
Fatty acid metabolism
Module
erp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LJN55_16410 (fadJ)
00650 Butanoate metabolism
LJN55_16410 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
LJN55_16410 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LJN55_16410 (fadJ)
00310 Lysine degradation
LJN55_16410 (fadJ)
00380 Tryptophan metabolism
LJN55_16410 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LJN55_16410 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LJN55_16410 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LJN55_16410 (fadJ)
00930 Caprolactam degradation
LJN55_16410 (fadJ)
Enzymes [BR:
erp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LJN55_16410 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LJN55_16410 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LJN55_16410 (fadJ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UDQ79039
LinkDB
All DBs
Position
complement(3545396..3547549)
Genome browser
AA seq
717 aa
AA seq
DB search
MEQKTAFTLSMRLDNVGVITIDVPDEKMNTLKEAFAGQIRDVLRQARSNPHLAGLVLISG
KPDSFIAGADISMIAVCDTAEQASALAHAGQTVMAEIAALPVPVVAAIHGACLGGGLELA
LACHHRVCSLDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGASTALDMILTGKTLRARAAL
KCGLVDDAVAASILLETAVKLALKARSARKPLPLRERLLTGPAGRAILFALAKRQTQAKT
HGNYPATDKILSVVRCGLEQGSGSGYAAEAQAFGELAMTPQSAALRSLFFATTALKKDPG
AQAAPRELKRIGVLGGGLMGGGIACITATRAGLPVRIKDVNPEGINRALKTSWQVLTQQV
NRRRLSVAERQQQMALISGGTDYQGFRQRDMVIEAVFEDLALKQKMVAEVEAHCSPDTLF
ASNTSSLPIADIASGAQRPENVIGLHYFSPPEKMPLVEVIPHAGTAAATVATAVALAKKQ
GKTPIVVADRAGFYVNRILAPYMIEAMHCLLEGEPIESIDHALVQFGFPVGPVQLLDEVG
IDVGTHIMPILQQAWGERFALPAALDAVLKDDRKGRKNGRGFYLYPQKGRKKQPDSAIYR
LLNISAKHHLSAQNIAQRCVMMLLNEAARTLDEEVVSCARDGDIGAVFGIGFPPFLGGPF
HYMDQLGIGEVVNSLEQLMQRHGPRFAPCERLKKMADAEETFYKPEVKLNSCTDSVG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaaacggcttttacgctcagcatgcgcctggataacgtcggcgtgatcact
atcgatgtgcctgatgagaagatgaacacgctgaaggaggcctttgccgggcaaattcgc
gatgtcctcagacaggcacggtccaatccgcaccttgccgggctggtgctgatctccggc
aagccggactcttttattgccggggccgatatcagcatgatcgcggtctgtgacacggca
gagcaggccagcgcgctggcacacgccgggcagaccgtgatggcggagatcgctgcgctg
ccggtgccggtcgtggccgccatccacggtgcctgcctcgggggcggcctggagctggca
ctggcctgccatcatcgcgtctgttcgctggatgataaaacccggctcggcctgccggaa
gtccagctggggctgttgccgggctccgggggaacgcagcggctgccgcgtctgattggc
gcttcgaccgcgctggatatgatcctgacaggcaaaaccctgcgtgcgcgtgcggccctg
aaatgcgggctggtggatgacgcggtggcagcgagtatattactggagacagcggtgaag
ctggcactgaaagcgcgcagcgccagaaagccgttaccgctgcgcgaacggctgttaacc
ggcccggcgggcagggcgatactgttcgcgctggcaaaacgccagacgcaggcgaaaacg
cacgggaattacccggcgacagacaaaatactcagcgtggtgcgctgcgggctggaacag
ggcagcggtagcggttatgccgccgaggcgcaggcatttggtgaactggcgatgacgccg
cagtccgccgctttgcgcagcctgtttttcgccactaccgccctgaaaaaagatccgggt
gcccaggctgcgccgcgtgagttgaagcgtattggtgtgctgggcggtggcctgatgggg
ggaggtatcgcctgcatcacggctacccgcgccgggctgcccgtgcgcattaaagatgtg
aacccggaaggcattaaccgggcgctgaaaaccagctggcaggtgctgactcagcaggtc
aaccgccgccgcctgagtgtggcagagcgtcagcaacagatggcattgatcagcggtggt
actgactatcagggcttccgccagcgtgatatggtcattgaagccgtctttgaagatctg
gcgctgaagcaaaaaatggtggctgaggttgaggcgcactgttcgccagacacgctgttt
gcttctaatacgtcatcgctgccgattgcggatattgcctccggtgcgcagcggccagag
aatgtcatcggtttgcattacttcagcccgccggaaaaaatgccgttggtggaggtgatc
ccccatgccggaacggctgcggccaccgtggccacggcggtggcgctggcgaagaaacag
ggtaaaacaccgattgtggtggccgatcgggccgggttctacgttaaccgcattctcgcc
ccctatatgattgaagcgatgcactgtctgctggaaggggagccgattgagtctattgac
cacgcgctggtgcagttcggtttcccggtggggccggtgcagttactggatgaagtaggg
attgatgtcggcacgcatattatgccaatcctgcaacaggcatggggcgagcgttttgca
ttaccggctgcgctggatgcggtgctgaaggacgatcgcaagggacggaagaacggacgt
ggtttctacctttatccacagaaagggcggaaaaagcagccggacagcgcgatttatcgc
ttgctgaatatcagtgcaaaacaccatctcagcgcacagaatatcgctcagcgctgtgtg
atgatgctgctgaatgaggcggcgcgtacgctggacgaagaggtggtttcctgcgcgcgt
gacggcgatatcggcgctgtttttggcatcggcttcccgccgtttctcgggggtcccttc
cactatatggaccagttgggcatcggtgaagtggtaaacagtttagagcaacttatgcag
cgtcacgggccgcgttttgccccttgtgaacgtttgaaaaaaatggctgacgccgaggaa
accttctataaaccggaagttaagctgaatagttgcactgattcagtgggatag
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