Erwinia rhapontici: LJN55_17535
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Entry
LJN55_17535 CDS
T08392
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
erp
Erwinia rhapontici
Pathway
erp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJN55_17535 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_17535 (ung)
Enzymes [BR:
erp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LJN55_17535 (ung)
DNA repair and recombination proteins [BR:
erp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LJN55_17535 (ung)
Prokaryotic type
LJN55_17535 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UDQ79246
LinkDB
All DBs
Position
3793348..3794031
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AA seq
227 aa
AA seq
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MVNTMTWHDVLAEEKEKPYFRETLAKVAAERAAGKTVYPPQKDVFNAFRLTELGEVKVVI
LGQDPYHGPNQAHGLAFSVLPGVAVPPSLVNMYKELVTDIPGFERPKHGFLESWARQGVM
LLNTVLTVEAGQAHSHAKFGWETFTDNVIAAINQHREGVIFLLWGSHAQKKGAIIDRNRH
HVLQAPHPSPLSAHRGFFGSAHFSKTNQWLSEHGETPIDWVPHLPSE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggtcaataccatgacctggcacgacgtgctggccgaggaaaaagagaagccttatttc
agggaaacactggcaaaagtcgcggcagagcgcgcagccggtaagaccgtctatccaccg
caaaaagacgtttttaacgcatttcgtctcactgaactgggcgaagtgaaagtggtgatt
ttaggtcaggacccctaccacggtccgaatcaggcacatgggctggcgttctccgttctg
cctggtgttgcggtacccccttcactggtgaatatgtataaagaactggtcacggatatt
cctggttttgagcgaccaaaacacggctttctcgaaagctgggcacgtcagggcgtgatg
ctgctcaacaccgtactaaccgtggaagcgggccaggcacattcacatgctaaattcggc
tgggaaacctttacggataatgtgattgcagccattaatcagcatcgtgagggcgtgata
tttctgctgtggggctctcacgcgcagaaaaagggcgcgattattgaccgtaaccgccat
cacgtactacaagccccccacccttccccgctctctgcgcatcgcggtttcttcggctct
gcccatttttcgaaaaccaatcagtggctcagtgagcacggcgaaacccccattgactgg
gttccgcacttaccttccgagtaa
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