Erwinia rhapontici: LJN55_18785
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Entry
LJN55_18785 CDS
T08392
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
erp
Erwinia rhapontici
Pathway
erp03030
DNA replication
erp03430
Mismatch repair
erp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJN55_18785 (dnaE)
03430 Mismatch repair
LJN55_18785 (dnaE)
03440 Homologous recombination
LJN55_18785 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erp03032
]
LJN55_18785 (dnaE)
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_18785 (dnaE)
Enzymes [BR:
erp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJN55_18785 (dnaE)
DNA replication proteins [BR:
erp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJN55_18785 (dnaE)
DNA repair and recombination proteins [BR:
erp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJN55_18785 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UDQ79464
LinkDB
All DBs
Position
complement(4068674..4072156)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKNAAKMGMPAIAITDFTNLCGLVKFYGTAHGQ
GMKPIIGADFNVSSEAMGDELSQITVLAADNDGYQNLTLLISRAYQRGYGPAGPTIDRDW
LVEHQQGIILLSGGRRGDVGKMLLRGNTAQVAECLAFYQHHFPDRYYLELIRTGRPDEET
YLHAAVALAMENAIPVVATNEVCFLTESEFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSSEEMCELFSDIPEALENSVEIARRCNVTIRLGEYFLPQFPTGDMTTEDFLVVKSKEGL
EDRLAFLFPDEQVRAERRPAYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARILEGVTRNAGKHAGGVVIAPTKITDFAPLYCDENGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALAMINARRAKEGKDPIDIAAIPLEDQKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGIDGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGQYQFHVNDNGEIVYGIGAIKG
VGEGPIEAIIDARNEGGYFRELFDLCARTDTKKLNKRVLEKLIMSGAFDRLGPHRAALMS
ALPDALKAADQHAKAEAIGQADMFGVLAEAPEQVEKSYSDVTPWPEQIQLDGERETLGLY
LTGHPINQYLKEIERYVGGLRLKDMHPTERGKMITAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKFQHMLEKDRILIVSGQVSFDDFNGGLKMMAREMMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARAKLRFGATWRVSPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcatttacgcgtccacagcgactactccatgatcgatggg
ctagccaaaactggcccgttggtgaaaaacgcggcaaaaatgggcatgccagccatcgcg
atcacggatttcaccaacctgtgtgggctggtaaaattttacggcactgcacacggtcaa
ggcatgaagccgattattggcgcagatttcaacgtcagtagtgaagccatgggtgatgag
ctgtcccaaatcaccgtactggccgccgataacgacggttatcaaaacctcaccttgttg
atttcccgagcctaccaacgtggctacggtccggcgggcccgacgattgatcgggactgg
ttggttgagcatcagcaggggattattttattgtcaggcggacgacgtggcgatgtcggt
aaaatgctgttgcgcggcaacacggcgcaggtcgcagagtgtctggcgttttatcagcat
cattttcccgatcgctactaccttgaactgattcgtaccggtcgcccggacgaagaaacg
tacctgcatgctgccgttgcgctggcgatggagaacgcgatcccggtggtcgccaccaac
gaagtctgtttcctgacggaatcagaattcgatgcacatgaaatccgcgtcgccatccac
gatggttttaccctcgacgatccaaaacgtccgcgcaactacagtccgcagcagtatatg
cgtagcagtgaggagatgtgcgagctgttctcggacatcccggaagcgctggaaaacagc
gtggaaattgcccgtcgttgtaacgtcactatccgtctgggtgagtacttcctgccgcag
ttcccaacgggtgacatgacaacggaagatttcctggtggtgaaatcgaaagaagggctg
gaagatcgcctggcgtttctgttccctgatgagcaggtgcgcgccgaacgccgccccgcc
tatgatgagcgcctggatattgaactcaacgttatcaaccagatgggattccctggttac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacgatgtgccagtggggccg
ggacgtggatcgggtgccggttcactggtggcctatgcgctgaaaattaccgacctcgac
ccgctcgaatttgatctgctgtttgaacgtttcctcaacccggaacgtgtgtcgatgccc
gacttcgacgtcgatttctgtatggaaaaacgcgatctggtgattgagcatgtggctgag
atgtacgggcgccaggcggtttcacagatcatcacctttggtaccatggcggcaaaagcg
gtcatccgcgatgtcggccgcgtgctggggcatccttacggtttcgtggatcgcatctcc
aaactggtgccacctgaccccggtatgacgctggaaaaagcctttgccgcagaaccgcag
ctgccagaaatctatgaggcagatgaagaggttaaagcgctgatcgacatggcgcgcatt
ctggaaggggtgacgcgcaacgccggtaagcatgccgggggcgtggtgattgcgccgacc
aaaattactgattttgccccgctctactgtgacgaaaatggccaccatccggttacccag
ttcgataagaacgatgtggaatatgccgggctggtgaaatttgacttcctggggctgcgc
acgctgacgatcatcgactgggcgctggcgatgatcaacgcccgtcgtgcgaaagaaggt
aaagatccgatcgatattgcggcgatcccgcttgaagatcagaaaagtttcgatatgctg
caacgctcggaaaccacggcggtgttccagctcgaatcacgcggcatgaaagacctgatc
aaacgcctgaagcctgactgcttcgaggatatgatcgctctggttgccttgttccgtccc
ggcccgcttcagtccggcatggtggataacttcattgaccgtaaacacgggcgtgaggcg
atatcttatccggatattcagtggcagcatgagtcgctgaagcccgtgctggagccgacc
tacggcattatcctctatcaggaacaggtgatgcagatcgcccaggtactggcaggatac
agcttaggcggggcggatatgctgcgtcgtgcgatgggtaaaaagaacccggttgagatg
gccaagcagcgtggcggctttgaagatggggcgaaatcacgcggcattgatggcgagctg
gcggttaaaatcttcgacctggtggaaaaattcgccgggtacggatttaacaaatctcac
tccgccgcttatgcgctggtctcttatcagactttgtggctgaaagcacactatccggct
gagtttatggccgccgtgatgactgccgatatggacaacaccgaaaaggtagttggcctg
gtggatgagtgctggcgcatggggctgaaggtcttaccgccggatattaactccgggcag
taccagttccacgttaacgataacggcgagattgtttacggcattggcgcgatcaaaggg
gtgggcgaaggcccgatcgaagccatcattgacgcacgtaatgagggcgggtatttccgc
gagctgtttgacctctgcgcacgcaccgataccaaaaagctgaataagcgggtgctggaa
aaactgattatgtccggcgcgtttgaccgtttaggtccgcaccgcgccgccttgatgagc
gccttaccggatgcattgaaagcagccgaccaacatgccaaagccgaagccatcggccag
gcagatatgtttggtgtgctggcagaagccccggaacaggtagagaagtcctattcggac
gtcacgccatggccggaacagattcaactggatggcgaaagagagacgttagggctttac
ttaacgggtcacccgatcaaccagtacttgaaagagattgagcgctacgtcggtggactg
cgcctgaaagacatgcacccgaccgagcgtggtaagatgatcaccgcagccggtctggtg
gtggcggcccgcgtcatggtaacaaaacgcggtaaccgtattggcatctgcaccctggat
gaccgttctggtcgtctggaagtgatgttatttacagatgcgttagataagttccagcat
atgttggagaaagaccgtatcctgatcgtcagtgggcaggtcagcttcgatgacttcaac
ggcgggcttaaaatgatggcccgcgagatgatggacattgatgaagcacgtgaaaaatat
gcacgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttgaaccgt
ctccgtcaatccctggaaccccatcgttcggggacaattccggtacatctctactatcag
agagaggatgcgcgggcgaagttgcgcttcggtgcaacctggcgcgtgtcgccgagcgat
cgtttgctgaacgatctgcgatcgttgataggatcggagcaggtggaactggagtttgac
taa
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