Erwinia rhapontici: LJN55_19890
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Entry
LJN55_19890 CDS
T08392
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_19890 (radA)
DNA repair and recombination proteins [BR:
erp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LJN55_19890 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
RecA_N
GvpD_P-loop
AAA_22
SLFN-g3_helicase
Rad51
AAA_14
ABC_tran
nSTAND_NTPase5
NTPase_1
AAA_16
AAA
nSTAND3
AAA_24
cobW
Zeta_toxin
Viral_helicase1
Zn_ribbon_Thio2
AAA_5
AAA_29
PAXNEB
DZR
Motif
Other DBs
NCBI-ProteinID:
UDQ79664
LinkDB
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Position
complement(4315836..4317218)
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AA seq
460 aa
AA seq
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MAKAVKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPVVARNERLTGYAGSAGP
SRVQKLSDISLDELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLS
EGMKTLYVTGEESLQQVAMRAHRLGLPTENLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTKGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVLWEGTRPLLVEIQALVDHSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALMLSMVSSLRDRPLPHDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPIANVPKKPPENMKVYGVKKLADALSILDEL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaagcggtaaagcgcgcctttgtctgtaacgagtgcggcgcagattatcctcgc
tggcagggccaatgtagcgcctgccatgcatggaatacgattactgaggtgcgtctggcg
gcatcgcctgttgttgcgcgcaatgagcgcctgacaggttacgccggtagcgccgggcca
agccgcgtgcagaaactgtcggacatcagtctcgacgaactcccgcggttttccaccggt
tttaaagagtttgaccgtgtgctgggcggtggtgtggtcccgggcagtgcgattctgatc
gggggtaaccccggcgcggggaaaagtaccctgctgttgcaaaccctgtgcaagctgtca
gaagggatgaaaaccctgtatgtcaccggggaagagtcgctgcaacaggtggcgatgcgc
gcccatcgtctgggattacccactgaaaatctgaatatgctgtcggaaaccagcatcgag
caaatctgcctgatcgccgagcaggagcagccgaaactgatggtgatcgactcgatacag
gtgatgcatatggccgatatccagtcctctcccggtagtgtcgcgcaggtgcgtgaaacc
gcagcctatctgacccgtttcgccaaaaccaaaggtgtcgccatcgtgatggtgggccac
gtgacgaaagacggttccctggcagggccgaaggtgcttgaacactgtattgactgttcg
gtgctgctggatggtgatgcggactcgcgtttccgtaccctgcgcagccataaaaaccgc
tttggtgcggtgaatgagctgggcgtgtttgccatgaccgagcaggggctgcgtgaagtg
agcaacccatcggcgatattcttaagtcgtggcgacgaagtcacctccggcagttcagtg
atggtgctgtgggaaggaacacgtccgctgctggtggagattcaggcgctggtggatcac
tcgatgatgggtaatccgcggcgcgttgcggtgggcctggagcagaaccgtctggcgatc
ctgctggccgtattgcaccgccacggcggcctgcaaatggccgatcaggatgtgttcgtc
aacgtcgtgggtggagtgaaagtcacggaaaccagtgccgacctggccctgatgctgtcg
atggtttccagtctgcgtgaccgcccgttaccgcacgatctggtggtgtttggtgaagtg
gggcttgcgggggagatccgcccggtgccaagtggtcaggagcgtatttccgaggcggct
aaacatggtttccgccgcgccattgtgccgatagcgaatgtgccgaagaagccaccggaa
aatatgaaagtgtacggtgtgaagaagctggctgacgcgttgtctatacttgacgaatta
taa
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