Erwinia rhapontici: LJN55_20870
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Entry
LJN55_20870 CDS
T08392
Symbol
frdA
Name
(GenBank) fumarate reductase (quinol) flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
erp
Erwinia rhapontici
Pathway
erp00020
Citrate cycle (TCA cycle)
erp00190
Oxidative phosphorylation
erp00620
Pyruvate metabolism
erp00650
Butanoate metabolism
erp00720
Other carbon fixation pathways
erp01100
Metabolic pathways
erp01110
Biosynthesis of secondary metabolites
erp01120
Microbial metabolism in diverse environments
erp01200
Carbon metabolism
erp02020
Two-component system
Module
erp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
erp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
erp_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LJN55_20870 (frdA)
00620 Pyruvate metabolism
LJN55_20870 (frdA)
00650 Butanoate metabolism
LJN55_20870 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LJN55_20870 (frdA)
00720 Other carbon fixation pathways
LJN55_20870 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LJN55_20870 (frdA)
Enzymes [BR:
erp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LJN55_20870 (frdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
GIDA
Lycopene_cycl
DAO
FabD_helical_ins
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UDQ79845
LinkDB
All DBs
Position
4517081..4518871
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AA seq
596 aa
AA seq
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MQTLNADLVIVGAGGAGLRAAIAAAEANPRLKIALISKVYPMRSHTVAAEGGAAAVTQEQ
DSFDSHFHDTVAGGDWLCEQPVVDYFVQHCPQEMAQMEQWGCPWSRKEDGSINVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLKYPQIQRLDEHFVLDLLVDDGVAHGLVAINMMEGT
LLEVRAQSVILATGGAGRVYRYNTNGGIVTGDGMGMAFRHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR
AGRTIATPRGDVVYLDLRHLGEKKLRERLPFICELSKAYVGVDPITAPIPVRPTAHYTMG
GIETNAECETRIQGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQAAQRASQPHP
VRDAALSAQRNDIEKRLHGLVNQQGSENAATLRDEMGMAMEEGCGIYRTTELMQKTIDKL
AELKQRFSNLRVTDTSSVFNTELLYAVELAHGLDVAECMAHSAIQRKESRGAHQRLDEGC
TTRDDEHFLAHTLTFFNPQGAPSVAYDPVTITHLPPAARVYGAASEGSTHKEPGHE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaccctgaatgccgatttagtcattgttggtgctggtggagccgggctgcgtgct
gcgattgccgccgcagaagccaacccgcgattgaagattgctctgatctccaaagtctat
ccgatgcgcagccacactgtggccgccgaaggcggtgccgccgccgtcactcaagagcag
gacagtttcgattctcattttcacgataccgttgccgggggcgactggctgtgcgaacaa
cccgtggtggactactttgttcagcactgcccgcaggaaatggcgcaaatggagcagtgg
ggctgcccgtggagccgcaaagaagatggctccatcaacgtccgtcgttttggcggaatg
aagattgaacgcacctggtttgccgccgataaaaccggcttccatatgctgcacaccctg
tttcaaacctcgctgaaatacccgcaaatccaacggcttgatgagcatttcgtcctcgac
ctgctggtggacgatggcgtggcgcacggtctggtcgcgatcaacatgatggaaggcacg
ctgctggaagtacgcgcacagtcagtgatcctcgcgaccggcggcgcgggccgcgtctat
cgctacaacaccaatggcggcattgtcaccggcgatggtatgggcatggcgtttcgccac
ggcgtcccactgcgcgatatggagtttgttcagtaccatcccaccggcctgccgggttcc
ggcattctgatgacggaaggctgccgtggtgagggcggtattctggtcaataaagacggt
taccgttacctgcaggattacggcatggggccggaaactccactcggggagccaaaaaac
aaatatatggagctaggcccgcgcgacaaggtttcccaggctttctggcacgaatggcgt
gcagggcgcaccatcgccacaccacgcggggatgtcgtctatctcgatctgcgccacctc
ggtgagaaaaaactgcgcgaacgtctgccgtttatctgcgaactgagcaaagcctatgtc
ggcgtggacccgattacggctccgatcccggtgcgtccgaccgcgcactacaccatgggc
ggcattgaaaccaacgccgagtgtgaaacgcgtatccagggtctgtttgccgtgggtgaa
tgttcctccgttggactgcacggggcgaaccgcctcggctctaactcgctagcagaactg
gtggtgtttgggcgcctggcgggcgagcaagccgcacagcgcgcttcccagccacatccg
gtgcgggatgccgcactcagcgctcagcgcaacgacattgaaaaacgactgcacgggttg
gtgaatcagcagggcagcgaaaatgcggccacgctgcgtgatgaaatgggcatggcgatg
gaagaaggctgcggcatctaccgcaccacggagctgatgcaaaaaaccatcgataagctg
gcggagctgaagcagcgtttttctaacctgcgtgtgaccgacacctccagcgtgttcaat
accgaactgctgtacgccgttgaactggcccacgggctggatgtggcggagtgtatggcg
cattcagccattcaacgtaaagagtctcgcggcgcacaccagcggctggatgaaggctgc
accacacgcgacgacgaacacttcctggcgcataccctgaccttcttcaacccgcaggga
gcgccttcggtcgcttacgatccggtgaccattacccatctgccgcctgctgcgcgcgtg
tatggcgcggcctctgagggcagcacccacaaggagcctggtcatgagtga
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