Erwinia rhapontici: LJN55_20920
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Entry
LJN55_20920 CDS
T08392
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
erp
Erwinia rhapontici
Pathway
erp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LJN55_20920 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erp03019
]
LJN55_20920 (groL)
03110 Chaperones and folding catalysts [BR:
erp03110
]
LJN55_20920 (groL)
03029 Mitochondrial biogenesis [BR:
erp03029
]
LJN55_20920 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
erp04147
]
LJN55_20920 (groL)
Enzymes [BR:
erp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LJN55_20920 (groL)
Messenger RNA biogenesis [BR:
erp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LJN55_20920 (groL)
Chaperones and folding catalysts [BR:
erp03110
]
Heat shock proteins
HSP60 / Chaperonin
LJN55_20920 (groL)
Mitochondrial biogenesis [BR:
erp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LJN55_20920 (groL)
Exosome [BR:
erp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LJN55_20920 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LJN55_20920 (groL)
Exosomal proteins of breast cancer cells
LJN55_20920 (groL)
Exosomal proteins of colorectal cancer cells
LJN55_20920 (groL)
Exosomal proteins of bladder cancer cells
LJN55_20920 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UDQ79854
LinkDB
All DBs
Position
complement(4523667..4525310)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DQAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGQLIAQAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGMELEKAGLEDMGQAKRVVINKDTTIIIDGTGEEVAINGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKLSELRGQNEDQNVGIKVALRAMESPLRQIVANAGEEPSVVTNNVKAGEGNYGYNA
QTEEYGDMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgcgcgcgtaaaaatgctgcgcggtgtg
aacgtactggcagatgcagtaaaagttaccctgggcccgaaaggccgtaacgtggttctg
gataaatcttttggtgcaccgaccatcacaaaagatggtgtttctgttgcgcgtgaaatc
gagctggaagacaagttcgaaaacatgggcgctcagatggtgaaagaagtcgcttccaaa
gctaacgacgctgcgggtgacggtaccaccactgctaccgtactggcacagtccatcatc
accgaaggcctgaaagccgtcgctgcgggtatgaacccgatggatctgaagcgcggcatc
gaccaggcggttatcgccgcggttgaagagctgaaaaaactgtctgtgccttgctctgac
tctaaagcgattgctcaggtcggtaccatctctgctaactccgatgaaaccgtgggccag
ttaattgctcaggcgatggaaaaagtgggcaaagaaggcgtgatcactgttgaagaaggc
accggtctgcaagacgagctggacgtggttgaaggtatgcagtttgaccgtggctacctg
tccccttacttcatcaacaagccagaaactggcgcagttgagctggaatctccattcatc
ctgctggctgacaaaaaaatctccaacatccgtgaaatgctgccagtgctggaagccgtt
gcgaaagccggtaaaccactgctgatcatcgctgaagatgttgaaggcgaagcgctggca
acgctggtggtgaacaccatgcgcggcatcgtgaaagtggctgcggttaaagctcctggt
ttcggcgaccgtcgtaaagccatgctgcaggacatcgctgttctgaccggtggtaccgta
atctcagaagagatcggtatggaactggaaaaagcaggtctggaagatatgggccaggcg
aaacgcgttgtgatcaacaaagacaccactatcatcattgatggtaccggtgaagaagtg
gcgatcaacggccgtgtgactcagatccgtcagcagatcgaagaagcaacttctgattac
gatcgtgaaaaactgcaggaacgtgtcgcgaaactggcaggcggcgttgccgttctgaaa
gtgggcgcagcgactgaagttgaaatgaaagagaagaaagcacgcgttgaagatgctctg
cacgctacccgtgcagcagtagaagaaggcgtggttgctggtggtggtgttgcactggta
cgcgtggcgtctaaactgtctgaactgcgtggccagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatccccactgcgtcagatcgttgctaacgccggtgaa
gagccatctgttgtgactaacaacgtgaaagcaggcgaaggtaactacggttacaacgcg
cagaccgaagaatacggcgacatgatcgacttcggcatcctggacccaaccaaagtgacc
cgttctgctctgcagtacgcggcttctgttgctggcctgatgatcactaccgaatgtatg
gtgactgatctgcctaaaggcgatgcgcctgatttaggcgcaggcggcatgggtggtatg
ggcggcatgggcggaatgatgtaa
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