Erwinia rhapontici: LJN55_21295
Help
Entry
LJN55_21295 CDS
T08392
Symbol
soxS
Name
(GenBank) superoxide response transcriptional regulator SoxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erp03000
]
LJN55_21295 (soxS)
Transcription factors [BR:
erp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LJN55_21295 (soxS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_3
EcsC
MBB1
CBM9_1
Motif
Other DBs
NCBI-ProteinID:
UDQ79927
LinkDB
All DBs
Position
4612960..4613385
Genome browser
AA seq
141 aa
AA seq
DB search
MHDDIISTLTDWIDNNLEKTLSIDEVAAKSGYSKWHLQRMFRSVTKQTLGGYIRERRLTL
AAEALRLTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRHTMRHASLKRSSWAFDC
SDYATSSFSQRVSEKSCPTCS
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgacatcatcagcaccctgactgactggatcgacaacaatctggaaaagact
ctgtcgattgatgaagtggcggcaaaatcaggctattcgaagtggcatttgcagcgtatg
ttccgttccgtgacgaaacagacgctgggcggatacattcgtgaacgccgtctgacgctg
gccgccgaagcgctgcgtctgacgcaacgtccggtatttgatattgccatgcagtacggt
tatgactcccagcagacgttttcacgcgtgtttcgccgccagttttcacagacaccgacc
gcctatcgtcacaccatgcgccatgcatccctgaagcgcagcagctgggcattcgactgt
agcgactatgccaccagcagcttcagccagcgggtcagtgaaaaatcctgcccgacttgc
agctaa
DBGET
integrated database retrieval system
