Erwinia rhapontici: LJN55_22010
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Entry
LJN55_22010 CDS
T08392
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
erp
Erwinia rhapontici
Pathway
erp00300
Lysine biosynthesis
erp00470
D-Amino acid metabolism
erp01100
Metabolic pathways
erp01110
Biosynthesis of secondary metabolites
erp01120
Microbial metabolism in diverse environments
erp01230
Biosynthesis of amino acids
Module
erp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LJN55_22010 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LJN55_22010 (dapF)
Enzymes [BR:
erp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LJN55_22010 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UDQ80049
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Position
complement(4781753..4782577)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKNDIRVSTQTGRMVLSVNQDELVCVNMGE
PNFEPQQVPFRANKAENIYLMRAAEQTVMCGVVSMGNPHCVLQVESVKTATVETLGPVLE
SHERFPERVNVGFMEVVSREHIRLRVYERGAGETQACGSGACAAVAIGIQQTLLAEKVRV
DLPGGTLNIAWKGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcaaaaatgcacggcctaggcaacgactttatggtggttgatgccgtcacg
caaaatgtctatttttcacccgaactgatccgtcgcctggccgaccgtcatctggggatc
ggctttgatcagctactgatcgtcgagccgccttacgatcccgatcttgatttccattat
cgtatttttaatgccgacggtagcgaagtggcacagtgtggcaacggtgcacgctgtttt
gcccgtttcgttcgcctgaaagggttgaccaataaaaatgatatccgcgtcagcacccaa
accggccgcatggtgttaagcgttaaccaagatgaactggtgtgcgtgaacatgggcgaa
cccaatttcgaaccacagcaggtacctttccgtgccaacaaagcggaaaacatctacctg
atgcgcgcggctgagcaaactgtgatgtgtggtgtcgtatcgatgggtaacccacactgt
gtcttacaggttgagagtgtaaaaactgccacggtggaaacactggggccggtgctggaa
agccacgaacgttttcctgagcgggtcaacgttggctttatggaagtggttagccgtgaa
catatccgtctgcgcgtgtatgaacgcggcgcgggtgaaacccaggcctgtggcagcggt
gcatgcgccgccgtcgcgatcgggatacagcagacgttgctggcggaaaaagtgcgggtt
gacctgcctggcggcacgctcaatatcgcatggaaaggtccggggcatcccctgtatatg
accggtcctgccactcacgtatatgacgggtttattcatttatga
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