Erwinia rhapontici: LJN55_23075
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Entry
LJN55_23075 CDS
T08392
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
erp
Erwinia rhapontici
Pathway
erp03030
DNA replication
erp03410
Base excision repair
erp03420
Nucleotide excision repair
erp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJN55_23075 (polA)
03410 Base excision repair
LJN55_23075 (polA)
03420 Nucleotide excision repair
LJN55_23075 (polA)
03440 Homologous recombination
LJN55_23075 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erp03032
]
LJN55_23075 (polA)
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_23075 (polA)
Enzymes [BR:
erp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJN55_23075 (polA)
DNA replication proteins [BR:
erp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LJN55_23075 (polA)
DNA repair and recombination proteins [BR:
erp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LJN55_23075 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LJN55_23075 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
SCP2
Motif
Other DBs
NCBI-ProteinID:
UDQ80241
LinkDB
All DBs
Position
complement(4990101..4992893)
Genome browser
AA seq
930 aa
AA seq
DB search
MAKIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYKPSHVAV
VFDAKGKTFRDELFEAYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLLAISGVEADDVIGT
LALAAEKIGKPVLISTGDKDMAQLVTPNITLINTMNNAILGPDEVVEKYGIPPSLMIDFL
ALMGDSSDNIPGVAGVGEKTAQALLQGLGGVKDIYANLDKVATLTFRGAKTMAAKLEQNK
EMALLSYQLATIKTDVELELTCDQLTVEEPAVEELLGLFKHYEFKRWIVDLEEGTWLQGN
KSRPTAAKGKMDATVEPDAAEVASVLSSEGYVTILDEATFDSWLTKLQQSELFAFDLETD
SLDTLSANIIGLSFAIAPGEAAYLPVAHDYLDAPDQLDRQSVLARLKPLLENPKALKVGQ
NLKYDRGVLANYDIELQGIQFDTMLESYALSSVVGRHDMDTLASRWLGHKTVSFEEIAGK
GKNQLTFNQIALEQAAHYAAEDADVTLRLHLKMWPELQKEQGPKEVFEQVEMPLVPVISR
IERNGVLIDQNILAVHSQELGSRLAELELKAHELAGEPFNLSSPKQLQTILFEKQGIKPT
KKTPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPHSGRVHTSY
HQTVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGCRIVAADYSQIELRIMAHLSQ
DKGLLTAFASEQDIHRATASEVFGVALDKVSGEQRRSAKAINFGLIYGMSAFGLSRQLNI
GAGEAKKYMDLYFERYPGVLQYMESTRELAAEKGYVSTLDGRRLYLPEIKASNAMRRKAA
ERAAINAPMQGTAADIIKRAMIAVDEWLKPQTNGDVKMIMQVHDELVFEVRADAVDSASA
KIRQLMEGSMKLDVPLRVDIGVGDNWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattgcagaaaacccgctgattctggtagatggatcttcctacctgtaccgt
gcttatcatgcgttccctccgctgaccaacagcgcaggcgaacctaccggtgcaatgtac
ggcgtattaaatatgctgcgcagcctgctgctgcaatataagccaagtcatgtagcagtg
gtatttgatgccaagggtaaaaccttccgcgacgaattatttgaagcgtacaaatctcac
cgtcccccgatgcccgacgatctgcgtgcgcaaattgaaccactgcataccatggtcaaa
gcgatggggctgccgctgctggccatctcaggtgtggaggctgatgatgtcatcggtacg
ctggcgctggccgcagagaaaatcggtaaaccggtgctgatcagcaccggtgataaagat
atggctcagctggtaacgccaaatatcaccttaatcaacacgatgaataatgcgattctt
ggcccggatgaagtggttgagaaatacggtatccctccctcgttgatgattgatttcctg
gcactgatgggcgactcctccgataacattccgggcgtagcgggtgtcggtgaaaaaacg
gctcaggcactgttacagggattaggcggagtgaaggatatttacgccaacctggataaa
gtggcaacactgactttccgcggggctaaaaccatggccgcgaaactggaacagaataag
gagatggccctcctctcctatcagttggcaacgattaagaccgacgtggaactggaattg
acctgcgatcagctgaccgttgaagaaccggcagttgaagaactgctggggttatttaaa
cactacgaatttaagcgctggattgttgatctggaagaaggtacctggctgcaagggaat
aagagtcgacccactgccgcaaaaggcaaaatggatgcaaccgtggaaccggatgccgca
gaagtcgctagcgtgctctcttccgaaggttatgtcaccattctggatgaagcgaccttc
gatagctggctgacgaagcttcagcaaagcgagttgtttgccttcgacctggaaaccgat
tcgctggatacgctcagtgctaacatcatcggcctgtcttttgccatcgccccaggtgaa
gccgcttacctgcccgttgcacatgactaccttgatgcaccggatcagttagatcgtcaa
tccgtactggcacggcttaaaccgctgctcgaaaaccccaaagcgcttaaagtcggacag
aatctgaagtacgaccgtggcgtgctggcaaactatgacattgaattacaaggtattcag
ttcgataccatgctggaatcttatgcgctgagtagcgttgtcgggcgccatgatatggat
accctggcatcacgctggctgggccataaaaccgtaagctttgaagagattgccggcaaa
ggtaagaatcagctgacgtttaaccagatcgcgctggagcaggcggcgcattacgcggcg
gaagatgccgacgtcacgctacggctgcatctgaaaatgtggccagagttgcagaaagag
caggggccaaaagaggtctttgaacaggttgagatgccgctggtgccggtcatctcccgt
attgagcgcaacggtgtgcttattgaccagaatattctggcggtgcactcgcaggagctg
ggcagccgcctggcagagctggagctgaaggcacacgagctggcaggtgaaccgttcaat
ctctcttcgccgaagcaattacaaaccatcctgtttgaaaagcagggcatcaagcccacc
aagaaaacgccgggtggtgcaccgtcgaccagcgaagaagtcttagctgagctggcgctg
gactatccgctgccgaaggtgattctggaacatcgtggtctctctaagctgaaatccacc
tataccgataagcttccgttgatgatcaatccacacagcggacgagtacatacttcttat
caccagacagtcacggctaccgggcgtctctcttccagcgatccgaacctacaaaacatc
ccggtgcgtaatgatgaagggcgacgtattcgtcaggcatttatcgcgccgaaaggctgt
cgcattgtcgcggctgactactcacagattgagctacgcatcatggcgcatctgtcacag
gataaagggctgctgaccgcctttgccagcgagcaggatattcaccgtgcgacagcctct
gaagtcttcggcgttgcgctggataaagtcagcggcgagcagcgccgtagcgctaaagcg
atcaactttggccttatttacggcatgagtgcttttggtctgtcacgtcagctcaatatt
ggtgccggtgaagcgaagaagtacatggacctctactttgaacgttacccgggtgtactg
cagtatatggagagtacccgcgaactggcggcagagaaaggctatgtctcgacgctggat
ggccgccgactctatctcccagagattaaagcgagcaatgcgatgcgtcgtaaagcggca
gagcgtgctgcgattaatgcaccaatgcaggggaccgcagcggatatcatcaaacgggca
atgattgccgtggatgaatggctgaagcctcagacaaacggtgacgtgaaaatgatcatg
caggtacacgatgaactggtgtttgaagtgcgtgccgatgcagtcgatagcgcatcagcg
aaaatccgtcagttgatggaaggcagcatgaaactggatgtgccgctgcgcgttgatatt
ggtgtgggtgacaactgggatcaggctcactaa
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