Erythrobacter sp. BLCC-B19: PS060_01190
Help
Entry
PS060_01190 CDS
T10682
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
erq Erythrobacter sp. BLCC-B19
Pathway
erq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PS060_01190 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erq03019
]
PS060_01190 (pnp)
03016 Transfer RNA biogenesis [BR:
erq03016
]
PS060_01190 (pnp)
Enzymes [BR:
erq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PS060_01190 (pnp)
Messenger RNA biogenesis [BR:
erq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PS060_01190 (pnp)
Transfer RNA biogenesis [BR:
erq03016
]
Prokaryotic type
tRNA degradation factors
PS060_01190 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
Peptidase_M64
Motif
Other DBs
NCBI-ProteinID:
WDA41454
LinkDB
All DBs
Position
complement(291481..293769)
Genome browser
AA seq
762 aa
AA seq
DB search
MFDTKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVIAQVLSF
DGETEADIVAMIAASAALTISGVPFMGPIGAARVGYVDGEYTLNPKQDKALAEGRLDLVV
AATDKAVMMVESEAKELTEEEMLGAVMFAHDEIRKVIGAIVELAEKAAKDPWDIDVSDNT
ADIKAKLKELVGADIAAAYKLTDKSARSNALNEARAKAKAAFADETPQTQMVAIKTMKKV
EADIVRTAILKEGSRIDGRKLDQVRPIEAIVGFLPRTHGSSLFTRGETQAICTTTLGTKD
SEQMIDGLEGLSYSSFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALNPVLPSKED
FPYTIRVLSDITESNGSSSMATVCGGCLSMMDAGVPVKAPVSGIAMGLILEGDEFAVLSD
ILGDEDHLGDMDFKVAGTAEGITTMQMDIKVAGITQEIMAKALEQAKAGRQHILGEMAKA
LTGARTEVSKHAPRIETIQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISSS
NLDEIEAAKKWILGIVEEAEVGKIYNGKVVNIVDFGAFVNFMGGKDGLVHVSEMRNERVE
KPTDVVSEGMEVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPPREPREPRGDRGDRG
DRRGPRGGGDRGRGGDRGGRGGDRGGRERDSGPAGLPDFLKD
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgaaaaccgtatcgctggagtggggcggaaagaccctcactctggaaacc
gggcgcattgcccgtcaggccgatggcgccgttctggccacctatggcgaaaccgtggtg
ctgtgcgccgtgaccgccgccaagagcgtcaaggaagggcaggacttcttcccgctcacc
gtccactatcaggaaaagttctcggctgccggccgtatccccggcggcttcttcaagcgt
gaacgcggcgcgaccgagaaggaaacgctcaccagccgcctgatcgaccgtccgatccgt
ccgctgttccccgaaggcttctacaacgagatcaacgtgatcgcgcaggtcctgtcgttc
gacggcgagaccgaagcggacatcgttgccatgatcgccgcgtcggctgcgctgaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggctatgtcgatggcgaa
tacacgctgaacccgaagcaggacaaggcgctcgctgaaggccgtctcgacctcgtggtc
gccgcgaccgacaaggccgtgatgatggtcgaatccgaagccaaggaactgaccgaggaa
gaaatgctcggcgctgtcatgttcgcgcatgacgagatccgcaaggtgatcggcgcgatc
gtcgagctggccgagaaggccgccaaggatccgtgggacatcgacgtcagcgacaacacc
gccgacatcaaggcgaagctcaaggaactggtcggcgccgatatcgccgcagcctacaag
ctcaccgacaagtcggcgcgttcgaacgcgctgaacgaggcgcgggccaaggccaaggcg
gcgtttgccgacgaaaccccgcagacccagatggtcgcgatcaagaccatgaagaaggtc
gaagcggacatcgtgcgcaccgccatcctcaaggaaggttcgcgcatcgatggtcgcaag
ctcgatcaggtgcgtccgatcgaagcgatcgtcggcttcctgccgcgcacccacggctcg
tcgctgttcacccgcggcgagactcaggcgatctgcaccaccaccttgggcaccaaggac
agcgagcagatgatcgacgggctcgaaggcctcagctattccagcttcatgcttcactac
aacttcccgccctattcggtcggtgaagtgggccgcttcggcgcgccgggtcgccgcgaa
gtcggtcacggcaagctcgcctggcgcgcgctgaaccccgtgctgccgagcaaggaagac
ttcccctacacgatccgcgttctcagcgacatcaccgagtcgaacggctcgtcctcgatg
gcgaccgtgtgcggcggctgtctgtcgatgatggacgcaggcgtgccggtgaaggcgcct
gtcagcggcatcgcgatgggcctgatcctcgaaggtgacgaattcgccgtcctctcggac
attctgggcgatgaagaccacctcggcgacatggacttcaaggttgccgggaccgccgaa
ggcatcaccacgatgcagatggacatcaaggtcgccggcatcacgcaggagatcatggcc
aaggcgctcgagcaggccaaggccggccgtcagcacatcctcggcgaaatggccaaggcg
ctgaccggtgcccgcaccgaagtcagcaagcacgcgccgcgcatcgagacgatccagatc
gacaagtcgaagatccgtgacgtcatcggcaccggcggcaaggtgatccgcgagatcgtc
gccgaaaccggcgccaaggtcgacatcgacgatgaaggcgtaatcaagatctcgtcttcg
aacctcgacgagatcgaagcggcgaagaagtggatcctcggcatcgtcgaggaagccgaa
gtcggcaagatctacaacggcaaggtcgtgaacatcgtcgatttcggcgctttcgtgaac
ttcatgggcggcaaggacggtctcgtccacgtctcggaaatgcgcaacgagcgggtcgag
aagcccaccgatgtcgtctccgaaggcatggaagtgaaggtcaaggtcctcgagatcgac
cagcgcggcaaggttcgcctgtcgatgcgcgtcgtcgaccaggaaaccggtgaagagctg
gaagacacccgtccgccccgcgaaccgcgcgaaccgcgcggtgatcgtggcgaccgcggc
gatcgtcgtggcccgcgtggcggcggcgaccgtgggcgcggcggtgatcgcggcggtcgc
ggtggtgaccgcggcgggcgcgagcgtgacagcggcccggcgggtctgcctgacttcctg
aaggactaa
DBGET
integrated database retrieval system
