Erythrobacter sp. BLCC-B19: PS060_05655
Help
Entry
PS060_05655 CDS
T10682
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
erq Erythrobacter sp. BLCC-B19
Pathway
erq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PS060_05655 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erq03021
]
PS060_05655 (rho)
03019 Messenger RNA biogenesis [BR:
erq03019
]
PS060_05655 (rho)
Transcription machinery [BR:
erq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PS060_05655 (rho)
Messenger RNA biogenesis [BR:
erq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PS060_05655 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
ATPase_2
AAA_22
NACHT
AAA_25
S1CSD-TOTE-2
AAA
AAA_14
GpA_ATPase
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDA42296
LinkDB
All DBs
Position
1227475..1228740
Genome browser
AA seq
421 aa
AA seq
DB search
MHLKDLKRKTPAELVAMAEELGVEGASTMRRQDLLFSILRELAEDEEYEEKIMGIGTIEV
LQDGFGFLRSPEANYLAGPDDIYVSPNQVRRWGLRTGDTVEGEIRAPRDGERYFALTSLA
KVNFDDPDAVRLRTNFDNLTPLYPDQKLTLDTLDPTVKDKSARVIDIIAPQGKGQRALIV
APPRTGKTVLLQNIAKAITDNHPEVFLIVLLVDERPEEVTDMQRSVKGEVISSTFDEPAN
RHVQVAEMVIEKAKRLVEHKHDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVSDKRIFPA
LDVGKSGTRKEELLVQKDNLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMN
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaagacttgaagcgaaagaccccggccgaactggtcgcgatggcggaagaa
ctcggcgtcgagggcgcctcgaccatgcgccggcaggatctgctgttctcgatcctgcgc
gaactcgccgaggacgaggaatatgaagagaagatcatgggcatcggcaccatcgaggtg
ctgcaggacggcttcggcttcctgcgctcgcccgaagcgaactaccttgccgggccggac
gacatctacgtctcgcccaaccaggtgcgccgctggggtctgcgcacgggtgacaccgtc
gaaggcgaaatccgcgcgccgcgcgatggcgagcgttatttcgcgctgaccagcctcgcc
aaggtcaatttcgacgatcccgacgcggtgcgcctgcgcaccaatttcgacaacctcacc
ccgctctatccggatcagaagctgacgctcgacacgctcgatcccacggtgaaggacaag
agcgcgcgggtgatcgacatcatcgcgccgcagggcaagggccagcgcgcgctgatcgtc
gcgccgccgcgcactggtaagaccgtgctgctccagaacatcgccaaggcgatcaccgac
aaccacccggaagtgttcctgatcgtgttgctggtcgacgaacgccccgaggaagtcacc
gatatgcagcgctcggtgaagggcgaggtgatctcctcgaccttcgacgagccggccaac
cgccatgtgcaagtcgctgaaatggtgatcgaaaaggccaagcgtctggtcgagcacaag
catgacgtggtgatcctgctcgactcgatcacccgtctcggccgtgcctacaacaccgtg
gtgccgagctccggcaaggtgctgaccggcggtgtcgatgcgaacgcgctccagcggccc
aagcgcttcttcggtgctgcgcgcaatatcgaggaaggcggctcgctttcgatcatcgcc
accgcgctgatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggcaactcggaaatcgtgctcgaccgcaaggtctcggacaagcgcatcttccccgcg
ctcgatgtcggcaagtccggcacccgcaaggaagaactgctcgtccagaaggacaatctc
agcaagatgtgggtgctgcgccgcatcctgatgcagatgggcaccgtagacgcgatggaa
ttcctgctcgacaagatgaaggattccaagaccaacgaagatttcttcgctacgatgaat
caatag
DBGET
integrated database retrieval system
