Erythrobacter sp. BLCC-B19: PS060_12175
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Entry
PS060_12175 CDS
T10682
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
erq Erythrobacter sp. BLCC-B19
Pathway
erq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
erq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PS060_12175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erq03021
]
PS060_12175
03400 DNA repair and recombination proteins [BR:
erq03400
]
PS060_12175
Enzymes [BR:
erq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PS060_12175
Transcription machinery [BR:
erq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PS060_12175
DNA repair and recombination proteins [BR:
erq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PS060_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
DUF5984
Motif
Other DBs
NCBI-ProteinID:
WDA40313
LinkDB
All DBs
Position
2608237..2609292
Genome browser
AA seq
351 aa
AA seq
DB search
MSVNTKNWQELKKPNSLEIKDGGDRQRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPGEVRAGDI
AVTGDIEVMNKNLVICHLDEGATLNMELTADTGKGYAPAVQNRPVDAPIGLIPVDSLYSP
VRQVSYKVENARVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLTLFVHFEDGIP
QPVGQMIGHAVQPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaacaccaagaactggcaggaactcaagaaacccaactccctggaaatcaag
gatggcggcgatcgtcaacgcaaggcgaccttcgtggccgaaccgctcgagcggggcttc
ggcctgacgctcggcaatgcgctgcgccgcgtgctcctgtcgagcctgcagggcgccgcg
atcacctcgatcaagatcgagaacgtgctgcacgaattctcgtcgctcgccggcgtgcgt
gaagacgtcaccgacatcgtcctgaacgtcaagcagatcgcgctcaagatggaaggcgaa
gggccgaagcggctccagctttcggcgaccggcccgggcgaagtgcgcgcgggtgacatt
gccgtcaccggcgacatcgaggtgatgaacaagaacctcgtgatctgccacctcgatgaa
ggcgcgacgctcaacatggagctgaccgcggacaccggcaagggctatgcgccggctgtg
cagaaccgtccggtcgatgcgccgatcggtctgatcccggtcgactcgctctactcgccc
gtgcgtcaggtgagctacaaggtcgagaacgcccgcgtcgggcaggagcttgactatgac
aagctctcgctgaccgtcgagaccgatggcaccgtcaccccggaagacgccgtggcctat
gctgcgcgcatccttcaggaccagctgacgctgttcgtccacttcgaagacggcatcccg
cagccggtcggccagatgatcggccatgccgtgcagccggaagaaagcgacgccaaccag
ctcaaccgttaccttctcaagaaggtggacgagctggaactgtcggtgcgttcggccaac
tgcctcaagaacgacaacatcatctacatcggcgatctggtccagaagaccgaagccgag
atgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtgctctcc
tcgatgggtctgcgcctcggcatggacatcccgggctggccgcccgagaacatcgaagag
atggccaagaagctcgagcaggagctgctcggctga
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