Erythrobacter sp. BLCC-B19: PS060_15040
Help
Entry
PS060_15040 CDS
T10682
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
erq Erythrobacter sp. BLCC-B19
Brite
KEGG Orthology (KO) [BR:
erq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erq03400
]
PS060_15040
Enzymes [BR:
erq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PS060_15040
DNA repair and recombination proteins [BR:
erq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PS060_15040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WDA40857
LinkDB
All DBs
Position
complement(3199794..3202832)
Genome browser
AA seq
1012 aa
AA seq
DB search
MAEPRKPGPLVYSIAAHRGFADALVAGIVPRYREEGFGLARLTLLVPSSRAARTLSEAFI
RHAGENGQGGLLMPRMIAVGDLDLDEKLGAALDPLGASDIPPACDPVWRWLTLGRLIAEE
RKAEGMAPLPGRARLNLAREMSRTMDRLLVEEKAPEDLWAEPVLDQMGQLAEHWKRSIRL
FARVNARWIDELGARGEVDAATRRNLLFDRASRRWKESPPAHAIIAAGVTSAAPALARLL
RVIAELPQGAVVLPDLDLAMDAPAWDELGLAGASTTPGGPVFGAADAVTHPQYHLKLLLN
RMGVNRAEVQPWHRRGIAAADPARSRAISALFLPPQASRAWIGLGAKERRLDGVRLMASA
TIEEEAQAIALLVREALEQPEQRIAVVTADRGLARRVGQHLERWNILADDSAGRPLALTP
AGRLFGLLAEITANGPDPSNLVAAFGHPLVRGWDGAVRREWLIGLRAFDRELRGPAPAPG
MEPLRDAATKAGVAEWWAEAEALVAALSDWPREIGLAEALARLAASAEAFARLAIWERED
GHALGQMVEELRSTADALGTVVETADLAGILRDAMEAVAVRPGYGGHPRVGIYGLLEARM
ARADLVICAGLNEGSWPQTPGADALLAPAILRALGVPGAEFRIGLAAHDLAGAMGAPQVV
LSRSLRDAEGPTLPSRFLLRVEALLGDDLDTEHRERAIPAILPLLDRARLRAPSYPRPEP
MPSPDQRRVPIKVTALDRLLGDPYQFYALAILDLRQLQPLAADPFSDPALRGTLVHAILD
KWHKARAAGADTPLGPFAAAYFDRERVHPLFRALWQPRLIAALERFEGWLEAAVAEGRTV
LATEISGEMEVDGVKVQGRADRIDRLADGTLAIVDYKTGRVPTKDAVKAGFALQLGLLGL
IAEHGRFADKETGKVVQGVASDFEYWSFKKDDGSFGKRETPMKVGQAKKGLLPEEFLPHH
RDKLRFAIHEYINGSEPFTARANPDYQGYNEYDQLMRLEEWLVRLTEPEASQ
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagccccgcaagcccggcccgctcgtctattcgattgccgcgcatcgcggtttt
gccgatgcgctcgtcgccgggatcgtgccgcgttaccgcgaagagggtttcggtctcgcg
cgattgaccctgctggtgccgagcagccgcgccgcgcgcacgctgtccgaggctttcatc
cgccacgctggcgagaacggccagggcggcttgctgatgccgcgcatgatcgcggtgggt
gatcttgatctcgacgaaaagctcggcgcggcgctcgatccgcttggcgcgtccgacatc
cctcctgcctgcgatccggtgtggcgctggctgacgctgggacggctgattgccgaggag
cgcaaggccgaaggcatggcgcccctgcccggacgcgcgcggctcaatctcgctcgggaa
atgtcgcgaaccatggaccggctgctggtcgaggaaaaggcgcccgaagacctatgggcc
gagccggtgctcgatcagatgggccagcttgccgagcactggaagcgttcgatccggctg
tttgcgcgggtcaatgcgcgctggatcgatgaactgggcgcgcgcggtgaagtcgatgcg
gcgacgcggcgcaacctgctcttcgaccgcgcgtcgcgccgctggaaggaaagcccgcct
gcgcacgcgatcattgctgccggtgtgaccagtgcagcgcctgcgctggcgcggctcctg
cgcgtgattgccgaactgccgcagggcgctgtggtgctccccgatcttgaccttgcgatg
gacgcgcctgcgtgggacgaactgggccttgccggtgcctcgaccacgccgggcggcccg
gttttcggcgcggccgatgcggtcacccacccgcaatatcacctcaagcttctgctcaat
cgcatgggcgtgaaccgggccgaggtgcagccctggcaccgccgggggatcgccgccgcc
gaccctgcgcgcagccgcgcgatttcggcgctgttcctgcccccgcaggcgagccgcgcg
tggattggccttggggcaaaagagcgccggctcgatggcgtgcgcctgatggcgagcgcc
acgatcgaggaggaggcgcaagccattgccttgcttgtgcgtgaggcgctggagcagccc
gaacagcgcatcgcggtcgtcaccgccgatcgcggccttgcgcggcgcgtcggtcagcat
ctcgaacgctggaatatccttgccgatgacagtgccgggcgcccgctcgcgctgaccccg
gcgggacgcctgttcggtctgctggccgagatcactgcgaacggccctgatccctcgaac
cttgttgctgcctttggccaccccttggtgcggggctgggacggcgcggtgcggcgggaa
tggttgatcggcctgcgcgccttcgaccgcgagctgcgtggccctgcgcctgcgccgggc
atggagcccctgcgcgatgctgcgacaaaggccggggtggccgaatggtgggctgaagcc
gaggcgctggtggctgcgttatccgattggccgcgtgagattggacttgccgaggcgctt
gcgcggctcgcggcatcggccgaagcatttgcccgcctcgccatttgggagcgcgaggat
ggccacgcgctcggccagatggttgaggaacttcgctccaccgccgatgcgctgggcacc
gtcgtcgagacagctgatcttgccggtatcttgcgcgatgcgatggaggcggtcgccgtg
cgccccggttatggcggtcacccgcgtgtcgggatctatggcttgctcgaagcgcgcatg
gcccgggctgatctggtgatctgcgccgggcttaacgaaggcagctggccgcaaacgccc
ggcgcagacgcgctgctggcgcccgcgatcctgcgcgcactgggcgtgccgggggccgag
ttccggatcgggctggccgcgcatgatcttgccggcgctatgggcgcgccgcaggtggtg
ctatcgcgcagtcttcgcgatgccgaggggccgaccctgccgtcgcgctttctgctgcgg
gttgaagccttgctcggcgatgatctggacacggagcaccgcgagcgtgcgatcccggcg
atcctcccgctgctcgaccgcgcaaggctgcgggcaccgagctatccgcgccctgagcca
atgccatcgcctgaccagcgccgcgtcccgatcaaggtgaccgcgctcgaccggctgctg
ggcgatccttaccaattctacgcgctggcgatcctcgatctgaggcaattgcagccgctt
gccgctgaccccttcagcgatccggcgctgcgaggcacgctggtgcacgcaatcctcgac
aagtggcacaaggccagagccgcaggcgctgacacgccgcttggccccttcgctgccgcc
tatttcgatcgcgagcgtgtccaccccttgttccgtgcgttgtggcaaccacgcctgatc
gccgcgctcgagcggttcgagggctggctcgaagccgccgtggcggaaggccgcaccgtg
cttgcgaccgagatttcgggcgagatggaggtggacggggtcaaggtgcagggccgcgcc
gaccggatcgaccggctcgctgacgggacgctcgcgatcgtggactacaagaccggccgg
gtgcctaccaaggacgcggtgaaggcgggcttcgcgctgcaactcggcctgcttgggctg
attgccgagcacggccgctttgccgacaaggaaaccggcaaggtggtgcaaggcgtggcg
agcgacttcgaatattggtccttcaaaaaggacgatggcagcttcggcaagcgagaaacg
ccaatgaaggtggggcaggccaagaagggtctcctgcccgaggaatttctcccccatcac
cgcgacaagctccgttttgcaatccacgaatacatcaatggcagcgagccgttcaccgcg
cgcgcgaaccccgattatcagggctacaacgaatatgaccagctgatgcgccttgaggaa
tggctggtgcgcttgaccgagccggaggcgagccaatga
DBGET
integrated database retrieval system
