Erythrobacter aureus: DVR09_00840
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Entry
DVR09_00840 CDS
T05587
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
err
Erythrobacter aureus
Pathway
err03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
err00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DVR09_00840 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
err03021
]
DVR09_00840 (rpoC)
03400 DNA repair and recombination proteins [BR:
err03400
]
DVR09_00840 (rpoC)
Enzymes [BR:
err01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DVR09_00840 (rpoC)
Transcription machinery [BR:
err03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DVR09_00840 (rpoC)
DNA repair and recombination proteins [BR:
err03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DVR09_00840 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
RPOC_hybrid
YqfD
HEAT_SGR6
Motif
Other DBs
NCBI-ProteinID:
AXK41065
UniProt:
A0A345YAW3
LinkDB
All DBs
Position
complement(162193..166521)
Genome browser
AA seq
1442 aa
AA seq
DB search
MNELTKFTNQLAKPETFDEIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFESYIVTEPGLTPLEKFQLLTEDELLEAQDEYGEDAFSAG
IGAEAVKIMLMDLDLEQEKEDLLEELATTKSKLKPAKIIKRLKVVESFIESGNRPEWMIL
EVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMERQEGKPEYVEDADGNKVEKLQMF
SDMAEVHQALETKQVSLHTKILARVPQADEDGNIVMKRFETTAGRMLIGECLPKNHKVPF
DIVNRLLTKKDIADVIDEVYRHTGQKDTVLFADAIMALGFRHAFKAGISFGKDDMIIPEE
KDGLVDETKALVADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVADAMMEKIKARPIGKD
GVQAEINSIYMMAHSGARGSPAQMKQLAGMRGLMAKPSGEIIENPIISNFKEGLNVLEYF
NSTHGARKGLADTALKTANSGYLTRRLVDVSQDCTIVVDDCKTENSLDMRAIVQGGSVIA
SLGERILGRTVAEDIVNAATGEVIAKAGTLLDEPMIKLIEEAEVQVAKIRSPLVCEARHG
VCATCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSHLEAVS
DGKVVYRDMPTITDKKGRILSLARNGELAVIDAEGREREIHKVPYGTVLMHKDGGKVKEG
DRLAEWDPFSLPIITETSGVVKFQDLIDGTTMEERVDDATGIAQRVVTETKTTGRKKNED
LRPRLTLFNDAGDESEAARYMLAPGTALSVEDGAEVQAGDILARASREAAKTRDITGGLP
RVAELFEARLPKDNSVIAKISGKIEFVREYKAKRKIAIVPEEGDAVEYLIPKTKVIDVQE
GDFVKKGDTLISGSPNPHDILEVLGVEALAEYLVNEIQEVYRLQGVKINDKHIEVIVRQM
LQKVEITDGGDTVLLPGEQVDLEELNETNSKLGRNKQPAVGTPILLGITKASLQTRSFIS
AASFQETTRVLTQAAVEGKKDTLVGLKENVIVGRLIPAGTGAGMNRMRITASSRDAALRA
QWKKTQEAIIAANTAEEEHEAELAQGPEAAIGDDPLASVEGETHGTDADAGDYLNEDAKD
GE
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgaccaaattcaccaaccagctcgcgaagcccgaaaccttcgacgagatc
cagatcggcatcgccagccccgagcgcatccgctcgtggtccttcggcgaaatcaagaag
ccggaaacgatcaactaccgcacgttcaagcccgaacgtgacggcctgttctgcgcgcgc
atcttcggtccggtgaaggattacgaatgcctgtgcggcaagtacaagcgcatgaagtat
aagggcgtcgtctgcgagaagtgcggcgtcgaagtgaccgtcaccaaggtccgccgcgag
cgcatgggccatatcgaactggccgcgccggtcgcgcatatctggttcctgaagtcgctg
ccttcgcgcatcggcctgctgctcgacatgcagttgaagcagctcgagcgcgtgctgtat
ttcgaaagctacatcgtcaccgagcccggcctgacgccgctggagaagttccagctcctc
accgaagacgaactgctcgaagcgcaggacgagtatggcgaagacgccttcagcgccggg
atcggcgccgaagcggtcaagatcatgctgatggatctcgatctcgagcaggagaaagag
gacctgctggaagagctcgcgaccaccaagtccaagctcaagccggccaagatcatcaag
cgcctgaaggtcgtcgaaagcttcatcgaatcgggcaatcgccccgaatggatgatcctc
gaagtcgtgccggtcattccgcccgagctgcgcccgctggtgccgctggacggtggtcgt
ttcgcgacttcggacctcaacgacctttaccgtcgtgtgatcaaccgcaacaaccgtttg
aaacgcctgatggaactgcgcgcgccggacatcatcgtccgcaacgaaaagcgcatgctg
caggaagcggtcgacgcattgttcgacaacggccgccgtggccgcgtcatcaccggcgcc
aacaagcgtccgctgaagtcgctgtccgacatgctcaagggtaagcagggccgcttccgt
cagaacctgctcggcaagcgcgtcgactattctggtcgttcggtcatcgtgaccggcccc
gaacttaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaagccg
ttcatctacgcccgcctcgacgccaagggtctttcgatgaccctcaagcaggcgaagaag
tgggtcgagaaggagcgcaaggaggtctgggacattctcgacgaggtcattcgcgagcac
cccgtcctcctcaaccgtgcgccgacgcttcaccgcctcggcatccaggcattcgagccc
gtgttgatcgaaggcaaggcgatccagcttcacccgttggtctgcgcagccttcaacgcc
gacttcgacggtgaccagatggccgttcacgtgccgctttcgctggaagcccagctcgaa
gcgcgcgtgctgatgatgtcgaccaacaacatcctctcgcccgccaacggcaagccgatc
atcgtaccttcgcaggacatggtgttgggtctctattacctctcgatggagcggcaggaa
ggcaagcccgagtatgtcgaggatgccgacggtaataaggtcgagaagctgcagatgttc
agcgacatggccgaagtgcaccaggcgctcgagaccaagcaggtctcgctccacaccaag
atcctcgcccgcgttccgcaggcggacgaggacggcaacatcgtcatgaagcggttcgaa
acgactgccggccgcatgctgatcggcgaatgcctgccgaagaaccacaaggttcctttc
gacatcgtcaaccgcctgctgacgaagaaggacatcgccgacgtgatcgacgaggtctat
cgtcacaccggccagaaggacacggtgctgttcgccgacgccatcatggcgcttggcttc
cgccacgcgttcaaggccggtatctccttcggcaaggatgacatgatcatccccgaggaa
aaggatggcctggtcgatgaaaccaaggcgctggttgccgattacgagcagcagtaccag
gacggcctgatcacccagcaggaaaagtacaacaaggtcatcgacgcctggagccgctgc
ggcgaccaggtggccgatgccatgatggagaagatcaaggcccgcccgatcggcaaggac
ggcgtccaggccgagatcaactcgatctacatgatggcccactcgggcgcgcgcggtagc
cctgctcagatgaagcagcttgccggtatgcgcggcctgatggccaagccgtcgggcgag
atcatcgaaaacccgatcatctcgaacttcaaggaaggtctcaacgttcttgaatacttc
aactcgacccacggcgcccgcaagggcctggcggataccgcgttgaagacggcgaactcg
ggctatctgacacgccgcctggtcgacgtgtcgcaggactgcaccatcgtggtcgacgac
tgtaagaccgaaaactcgctcgacatgcgcgccatcgtgcagggcggttcggtcatcgca
tcgctcggcgaacgtatcctgggccgcaccgtggccgaggacatcgtcaatgcggccacc
ggcgaagtcatcgccaaggccggtacgctgctggacgaaccgatgatcaagctcatcgag
gaagccgaagtccaggttgccaagatccgcagcccgctggtctgcgaagcccggcacggc
gtctgcgccacctgctacggccgtgacctggcgcgcggtacgccggtcaatatcggtgaa
gccgtgggcgtcatcgccgcgcagtcgatcggtgaacccggtacgcagcttaccatgcgt
accttccacatcggcggcgccgcgcagctcaacgagacctcgcatctcgaagcggtgtct
gacggcaaggtcgtctatcgcgacatgccgaccatcaccgacaagaagggccgcatcctg
tcgctcgcgcgcaatggcgaactggcggtgatcgatgccgagggccgcgaacgcgaaatc
cataaggtgccttacggtactgtgctgatgcacaaagatggcggcaaggtgaaggaaggc
gatcgtctggcggaatgggatccgttcagcctgccgatcatcaccgaaacctcgggcgtg
gtgaagtttcaggacctcatcgatggcacgaccatggaagagcgcgtcgacgatgccacg
ggtatcgcccagcgtgtggttaccgaaaccaagaccaccggccgcaagaagaacgaagat
ctgcgtccgcgcctgaccctgttcaacgatgcgggcgacgagagcgaggccgcgcgttac
atgctggcgccgggcaccgcgctttcggtcgaggacggggccgaggtccaggcgggcgac
attctggctcgcgccagccgcgaagctgccaaaacccgcgacatcaccggcggtctgccg
cgggttgccgaactgttcgaggcacgtcttccgaaggacaattcggtcatcgccaagatt
tcgggcaagatcgaattcgttcgcgaatacaaggcgaagcgcaagattgcgatcgtgccg
gaggaaggtgatgcagtcgagtacctgatccccaagaccaaggtgatcgacgtgcaggaa
ggcgacttcgtgaagaagggtgacaccctgatttccggttcgcccaatccgcacgacatc
ctcgaggttctgggcgtcgaggcgctggccgaatatctcgtcaacgaaatccaggaagtc
taccgactgcagggtgtgaagatcaacgacaagcacattgaggtgattgttcgccagatg
ctgcagaaggtcgagatcaccgacggtggcgacaccgtgctgctgccgggcgaacaggtc
gatctggaagagctgaacgaaaccaactcgaagctgggccggaacaagcagcccgcagtg
ggcacgccgatcctgctgggcatcaccaaggccagcctgcaaacgcgttcgttcatctcc
gccgcttcgttccaggaaaccacgcgcgtgcttacgcaggccgcggtcgaagggaagaag
gacacgctggtcggcctgaaggaaaacgtgatcgtgggccgtctcatcccggcgggcacc
ggcgcgggcatgaaccgcatgcgtatcaccgcctcgagccgcgatgccgccctgcgcgcc
cagtggaagaaaacacaggaggcgatcatcgccgccaacactgcagaggaagagcatgag
gcggaactcgcccagggccccgaagcggcaatcggcgatgatccgctggcgagcgtcgaa
ggcgaaacgcacggcaccgatgccgatgctggcgattacctcaacgaggacgccaaggac
ggcgaataa
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