Erythrobacter aureus: DVR09_01615
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Entry
DVR09_01615 CDS
T05587
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
err
Erythrobacter aureus
Pathway
err03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
err00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVR09_01615 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
err03019
]
DVR09_01615 (recQ)
03400 DNA repair and recombination proteins [BR:
err03400
]
DVR09_01615 (recQ)
Enzymes [BR:
err01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DVR09_01615 (recQ)
Messenger RNA biogenesis [BR:
err03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DVR09_01615 (recQ)
DNA repair and recombination proteins [BR:
err03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVR09_01615 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
SAM_GIDA_C
Motif
Other DBs
NCBI-ProteinID:
AXK41193
UniProt:
A0A345YB91
LinkDB
All DBs
Position
complement(334702..336471)
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AA seq
589 aa
AA seq
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MSGNAGVLQALKDTFGFDAFRGRQEEVVARALAGESTLAVMPTGAGKSLTYQLPAVLLEG
TCVVISPLIALMHDQLRSARANGIRAATLTSADADWRETQDAFRAGELDLLYVAPERASQ
PAFREFLSNSSLCLFAIDEAHCVSEWGHDFRPDYRMLRGLMDAFPTVPRLALTATADNQT
RADVMAQLGIADNGLVLAGFDRPNIRYAIRHRDNPVRQLNELMANEPGPGIVYAQTRRKV
EDLAEKLATATGRPVLPYHAGLDPEVRAANQAAFVASEDIVIVATVAFGMGIDKPDVRFV
AHVGVPKSIEGYYQETGRAGRDGDPAQAIMFWGAGDFATARQRLAEVDEARRNAERARLD
ALAGLVETAECRRAVLLRHFGEDPPSRCGNCDNCLEPASVTDVTQLARKLLSAVYRTGQS
FGMGHLQKVLTGNEDERVRQRGHDRLSVFGIVEGDEARLLQPLSRALQARGDLVATEHGG
LALGGSARAILRGERTVEIVVPPKRSRGRRADATPNPIGDPLFEALRALRKEVAEKAQVP
PYVVFHDSTLREMTSARPETLAQLGRLPGIGAKKLEAYGEQFLRAIWEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaatgcaggcgtacttcaggccctcaaggacaccttcggtttcgatgccttt
cgcgggcgtcaggaagaggttgtcgctcgggcgctggcaggtgaatcgacgctggcggtg
atgccgacgggggctggcaaatcgctcacctaccaattgcctgcagtcctgctggagggg
acctgcgtggtgataagcccgctgatcgccctgatgcacgaccagctcagaagcgcacgg
gccaatggcattcgcgcggcaacgctgaccagcgccgatgccgattggcgcgaaacgcag
gatgccttccgcgctggcgagctcgacctgctctatgtcgcgcccgaacgcgcgagccag
ccagcttttcgcgagttcctgtcgaactcgtctctgtgcctgttcgccatcgacgaggcg
cattgcgtgtccgaatgggggcacgattttcgccccgactaccgcatgctgcgggggctg
atggacgccttccccacggtcccgcgcctagcgctgaccgcgaccgcggacaatcagacg
cgcgccgatgtgatggcgcagctgggcattgcagataacgggctggtgctggccggattc
gaccggcccaatatccgctacgcgatccgtcaccgcgacaatccggtgcgccaactgaac
gagctgatggcgaacgagccgggtccggggatcgtttatgcgcaaacacggcgcaaggtg
gaggatcttgccgaaaagcttgcaaccgcgaccggcaggccggtattgccttatcacgcc
gggctggatccggaggttcgcgcggccaaccaagccgctttcgtcgcgtccgaagatatt
gtgatcgttgccacggtcgctttcggcatgggtatcgacaaaccggacgtgcgcttcgtg
gcgcatgtcggcgtgcccaaatcgatcgagggatattaccaggaaacgggccgcgccggg
cgcgatggggacccggcccaagcgatcatgttctggggcgcgggcgatttcgccaccgcg
cgtcagcggctcgccgaggtcgacgaggctcggcgcaatgccgagcgcgcgcggctcgat
gcacttgccggactggtcgagactgccgaatgccgccgtgcggtgctattgaggcatttc
ggcgaagacccgccttcgcgctgcggtaattgcgacaattgcctcgagcccgcgagcgtc
accgacgtcacgcagctcgcgcgcaaactgctatccgccgtctaccgtaccggacagagc
tttgggatggggcacttgcagaaggtgctcaccggcaacgaggacgagcgcgtgcgccaa
cgcgggcacgaccggctgagcgtgttcggcatcgtcgagggcgacgaggcacgcctgctc
cagccgctgtcgcgggccttgcaggcgcgcggcgatcttgtcgcgaccgaacatggcggg
ctggcattgggcggttcggcccgtgcgattctcaggggggagaggacggtggagatcgtg
gttccccccaagcggtcgcgcggacgaagggccgatgcgacacccaatccgatcggtgat
ccgctgttcgaagcgcttcgggccttgcgcaaggaagtggccgagaaagcccaggtcccg
ccctacgtcgtcttccacgattccactctgcgcgagatgacctccgcgcgccccgaaacg
ctggcgcaactgggccggctgcccggcattggggccaagaaactcgaagcatatggagag
cagtttctgcgggccatctgggagcattga
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