KEGG   Erythrobacter aureus: DVR09_10210
Entry
DVR09_10210       CDS       T05587                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
err  Erythrobacter aureus
Pathway
err03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:err00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DVR09_10210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:err03019]
    DVR09_10210
Messenger RNA biogenesis [BR:err03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DVR09_10210
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1 RNase_J_C Lactamase_B_6 Lactamase_B_3
Other DBs
NCBI-ProteinID: AXK43581
UniProt: A0A345YI29
LinkDB
Position
complement(2086971..2088551)
AA seq 526 aa
MNVNLYGCQGRWLMVDLGMTFSGDQYPGVDLVFADLEFIEDRADKLDAIVLTHAHEDHIG
AVPYFAADLDVPIYATPFTAELVRRKLQEAGLVDQVEVHVISDDHGSFAIGPFEITYIPL
AHSIAEGNALLIDTPHGRIFHTGDWKLDEDPIIGVPTTEEELTEIGDEGVLALVCDSTNV
FNPAPSGSEGAVHKGLLEEVQRRAGKRVLVTTFASNVARLQTLGDVARETGRRICVAGRS
LDRIIEVSQDNGYLLDFPEPLDFDTAMGLPRGELLILATGGQGEPRAALARIADENHPLE
LVSGDVVLFSSRQIPGNEISIGAVQNKLAARGITMVTDRQSMIHVSGHPGRPELEALYGW
LRPDILVPVHGEMRHMQEQGRLGKANGIPDQVVQQNGDIVRLAPGAPGKVAEVRAGRLVL
DGDIIVPADGEAIAMRRRIMREGVVIVALDGDLNPRLDSIGLPLDEDYGDFLAEAADDIR
AAIAKLRGRDRRDEASIHEAARLAARRAAQRWSGKRPQVRVILPNL
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgaacgtcaacctctacggatgccagggtcggtggctgatggtcgatctcggcatgacg
ttttcgggcgatcaatatcctggcgtcgatctcgtcttcgccgatctcgaattcatcgaa
gaccgcgccgacaagctcgatgcgatcgtgctgacccacgcgcatgaagaccatatcggt
gcggtgccctatttcgcggccgatctcgatgtgccgatctatgcgacaccgttcactgcc
gagcttgtccggcggaaactgcaggaagccgggctggtcgaccaggtcgaggtgcatgtc
atttccgacgatcatggcagctttgccatcggtccgttcgagattacctatatcccgctc
gcccactcgatcgcggaaggcaatgcgctgctgatcgatacgccgcatgggcgcatcttc
catacgggcgactggaaactcgatgaagacccgatcatcggcgtgccgaccaccgaagaa
gagctgaccgaaatcggtgatgagggcgtgcttgcgctggtctgtgacagcaccaatgtc
ttcaatcccgcacccagcggatcggaaggggcggtgcacaaggggctgctcgaagaggtg
cagcgccgcgctggcaagcgcgtgctggtcacaaccttcgccagcaatgtcgcgcgtttg
cagacattgggcgatgtcgcgcgcgaaaccggacggcggatatgtgtcgccgggcggtcg
ctcgatcggatcatcgaagtttcgcaggataatggctatctgctggacttccccgagccg
ctcgacttcgacaccgcgatgggcctgccgcgcggcgaattgctgatcctggccacgggc
gggcagggcgagccgcgcgcggcgcttgcccggattgccgacgagaaccacccgctcgaa
ctcgtaagcggcgatgtcgttctgttctcgagccgccagatccccggcaacgagatttcg
atcggggcggtgcagaacaagctggccgcgcgcggaatcaccatggtcaccgatcgccag
agcatgatccatgtatccggccatccgggacgccccgaactggaagcgctctatgggtgg
ctgcgaccggacatcctcgttcccgttcacggggaaatgcgacatatgcaggagcagggc
aggctgggtaaggccaatggcattcccgatcaggtcgtgcagcagaacggcgatatcgtc
cgcctcgcgccgggcgcaccgggcaaggtggccgaagtgcgggcaggcaggctcgtcctc
gatggcgacatcatcgttcccgccgatggcgaggccatcgccatgcgccgccggatcatg
cgcgaaggcgtggtcatcgttgcgctggacggcgatctcaatccgcgtctcgacagtatc
ggcctgccgctggacgaggattacggggattttctcgcggaagcggcggacgatattcgt
gccgcgatagcgaagctgcgcgggcgcgaccggcgcgacgaggcgagcatccacgaggcc
gcgcgcctcgccgcccgccgcgcggcccagcgctggtcgggcaaacgccctcaggttcgc
gtcattctgcccaatctgtag

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