Erythrobacter aureus: DVR09_10210
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Entry
DVR09_10210 CDS
T05587
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
err
Erythrobacter aureus
Pathway
err03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
err00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVR09_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
err03019
]
DVR09_10210
Messenger RNA biogenesis [BR:
err03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DVR09_10210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
RNase_J_C
Lactamase_B_6
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
AXK43581
UniProt:
A0A345YI29
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Position
complement(2086971..2088551)
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AA seq
526 aa
AA seq
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MNVNLYGCQGRWLMVDLGMTFSGDQYPGVDLVFADLEFIEDRADKLDAIVLTHAHEDHIG
AVPYFAADLDVPIYATPFTAELVRRKLQEAGLVDQVEVHVISDDHGSFAIGPFEITYIPL
AHSIAEGNALLIDTPHGRIFHTGDWKLDEDPIIGVPTTEEELTEIGDEGVLALVCDSTNV
FNPAPSGSEGAVHKGLLEEVQRRAGKRVLVTTFASNVARLQTLGDVARETGRRICVAGRS
LDRIIEVSQDNGYLLDFPEPLDFDTAMGLPRGELLILATGGQGEPRAALARIADENHPLE
LVSGDVVLFSSRQIPGNEISIGAVQNKLAARGITMVTDRQSMIHVSGHPGRPELEALYGW
LRPDILVPVHGEMRHMQEQGRLGKANGIPDQVVQQNGDIVRLAPGAPGKVAEVRAGRLVL
DGDIIVPADGEAIAMRRRIMREGVVIVALDGDLNPRLDSIGLPLDEDYGDFLAEAADDIR
AAIAKLRGRDRRDEASIHEAARLAARRAAQRWSGKRPQVRVILPNL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaacctctacggatgccagggtcggtggctgatggtcgatctcggcatgacg
ttttcgggcgatcaatatcctggcgtcgatctcgtcttcgccgatctcgaattcatcgaa
gaccgcgccgacaagctcgatgcgatcgtgctgacccacgcgcatgaagaccatatcggt
gcggtgccctatttcgcggccgatctcgatgtgccgatctatgcgacaccgttcactgcc
gagcttgtccggcggaaactgcaggaagccgggctggtcgaccaggtcgaggtgcatgtc
atttccgacgatcatggcagctttgccatcggtccgttcgagattacctatatcccgctc
gcccactcgatcgcggaaggcaatgcgctgctgatcgatacgccgcatgggcgcatcttc
catacgggcgactggaaactcgatgaagacccgatcatcggcgtgccgaccaccgaagaa
gagctgaccgaaatcggtgatgagggcgtgcttgcgctggtctgtgacagcaccaatgtc
ttcaatcccgcacccagcggatcggaaggggcggtgcacaaggggctgctcgaagaggtg
cagcgccgcgctggcaagcgcgtgctggtcacaaccttcgccagcaatgtcgcgcgtttg
cagacattgggcgatgtcgcgcgcgaaaccggacggcggatatgtgtcgccgggcggtcg
ctcgatcggatcatcgaagtttcgcaggataatggctatctgctggacttccccgagccg
ctcgacttcgacaccgcgatgggcctgccgcgcggcgaattgctgatcctggccacgggc
gggcagggcgagccgcgcgcggcgcttgcccggattgccgacgagaaccacccgctcgaa
ctcgtaagcggcgatgtcgttctgttctcgagccgccagatccccggcaacgagatttcg
atcggggcggtgcagaacaagctggccgcgcgcggaatcaccatggtcaccgatcgccag
agcatgatccatgtatccggccatccgggacgccccgaactggaagcgctctatgggtgg
ctgcgaccggacatcctcgttcccgttcacggggaaatgcgacatatgcaggagcagggc
aggctgggtaaggccaatggcattcccgatcaggtcgtgcagcagaacggcgatatcgtc
cgcctcgcgccgggcgcaccgggcaaggtggccgaagtgcgggcaggcaggctcgtcctc
gatggcgacatcatcgttcccgccgatggcgaggccatcgccatgcgccgccggatcatg
cgcgaaggcgtggtcatcgttgcgctggacggcgatctcaatccgcgtctcgacagtatc
ggcctgccgctggacgaggattacggggattttctcgcggaagcggcggacgatattcgt
gccgcgatagcgaagctgcgcgggcgcgaccggcgcgacgaggcgagcatccacgaggcc
gcgcgcctcgccgcccgccgcgcggcccagcgctggtcgggcaaacgccctcaggttcgc
gtcattctgcccaatctgtag
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