Erysipelothrix rhusiopathiae SY1027: K210_00420
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Entry
K210_00420 CDS
T02688
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ers
Erysipelothrix rhusiopathiae SY1027
Pathway
ers03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ers00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K210_00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ers03019
]
K210_00420
03016 Transfer RNA biogenesis [BR:
ers03016
]
K210_00420
Enzymes [BR:
ers01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K210_00420
Messenger RNA biogenesis [BR:
ers03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K210_00420
Transfer RNA biogenesis [BR:
ers03016
]
Prokaryotic type
tRNA degradation factors
K210_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
OB_RRP5_4th
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AGN23723
LinkDB
All DBs
Position
79872..82010
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AA seq
712 aa
AA seq
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MNKRVFELDFCGKNLKVETGELAKQAGGSVLVRYEDTVVLSAATASKKAKDIDFFPLTVT
YEEKLYSVGKIPGGFLRREGRPSEHATLTSRLIDRTIRPLFAEGFRNEVQVVNTVLSVDQ
DSAPDMAAMFGASLSLMVSDIPFEGPIAGVTVGYIDETFVINPTLEEQAKSKMHLIVAGT
KDAINMVEAGAEEVSEELMLEAMLFGHEWIKRLCAFQIEIAQEVAKEKMEVTLYEVPSEI
VEEVEALVGKDLREAVAIHEKLKRYGMIDELEEKAVLHFEAKSYETESEKHKTVKYVKEV
THGMVADEVRRLISIEKIRPDGRGVDEVRPLNVQIDLLSRVHGSGLFTRGETQVLSVCTL
GAMADTQIIDDLSDVDSKRFLHHYNFPPYSVGETGRMGAPGRREIGHGALGERALSYVIP
SEEEFPYTIRLVAEVLESNGSSSQASICAGSLALMAAGVPVKAAVSGIAMGLVQYGDDYT
ILTDIQGMEDHFGDMDFKVAGTKKGITALQMDIKIKGLSEDILREALAQAKTGRAEMMAA
MDEVISEPRNFVGEYAPKIAQMNIKPDKIRDVIGAGGKIINQIIEDCNDVKIDIEDDGRV
VIYHTDQASIDKAKAMIENIVRVAAVGEIYDAKVVRIEKFGAFVNLFQGTDALLHVSKMD
HNRVEKPEDIVKLGDIVKVKVMEIDEKGRVNVSRKALLPKPEVKKEDEKSAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagagtatttgaactagatttttgtggaaaaaatctaaaagttgaaacggga
gaattagcgaaacaggctggtgggtctgttttagtgcgttatgaagatactgtagtatta
tcagctgcaactgcaagtaagaaagcgaaagatatcgatttcttcccactaacagttaca
tatgaagaaaaattatattcagttggtaagattccaggtggatttttacgtcgtgaaggg
cgtccaagtgaacatgcaacattaacatcacgtttaattgatcgtacaattcgtccattg
tttgcggaaggattccgtaatgaagtacaagttgtaaatacagtattatctgttgatcaa
gacagcgcaccagatatggctgcaatgtttggggcatctttatcattaatggtatcggat
attccttttgaaggtcctattgctggagttacagtagggtatattgatgaaacatttgta
attaatccaacacttgaagaacaagcaaaatcaaaaatgcatttgattgttgcgggtact
aaagatgctattaatatggttgaagcgggtgcagaagaagtttcggaagaactcatgctt
gaagcaatgttatttggtcatgaatggattaaacgtctatgtgcattccaaattgaaatt
gcacaagaagtagcgaaagaaaaaatggaagttaccctatacgaagtgccttctgaaatc
gtagaagaagtagaagcgcttgtaggtaaagacttacgtgaagcagtcgcaatccatgaa
aaattaaaacgttatggcatgattgatgaactcgaggaaaaagctgtattgcatttcgaa
gcgaaatcatacgaaacggaatctgaaaagcataaaacagtgaagtacgttaaagaagtc
acacacggcatggttgcggatgaagttcgtcgactcatttcgattgaaaaaattcgtcct
gatggtcgtggtgttgatgaagtacgtcctttaaacgttcaaattgatttgttaagtcgt
gtacacggtagtggactctttacacgtggtgaaactcaagtactctctgtttgtacatta
ggtgcaatggcagatactcaaataattgatgacttatccgatgtggattcaaaacgtttc
ctacatcattataatttcccaccatacagtgttggtgaaacaggccgtatgggtgcacca
ggacgtcgtgaaattggacatggtgctttaggtgagcgtgctctatcctatgttattcct
tctgaagaggaattcccatatacaattcgtttagtagcggaagttcttgaatcaaacggt
tcttcttcacaagcaagtatttgtgcaggttcattagcacttatggcagcgggtgttccc
gttaaagccgcagtgagtggtattgcaatgggtcttgttcaatatggtgatgattataca
atccttacagatattcaaggaatggaagatcattttggagatatggactttaaggttgct
ggaactaaaaaagggattaccgcccttcaaatggatattaagattaaaggcttatccgaa
gacattttacgcgaagcattagcacaagcgaaaacaggtcgtgcggaaatgatggctgcg
atggatgaagttatttcagaacctcgtaactttgttggtgaatatgctcctaagatcgct
caaatgaacatcaaaccggacaaaatccgtgatgttattggtgcgggtggaaaaatcatt
aaccaaatcattgaagactgtaatgatgttaagattgacattgaagatgatggtcgtgtt
gttatttaccatactgatcaagcttcaattgataaagcgaaagcaatgattgaaaatatc
gttcgtgtagctgctgttggagaaatttacgatgcgaaagttgtacgtattgaaaaattc
ggagcattcgtaaatctattccaaggtacggatgcactcttacatgtttctaagatggat
cataaccgtgttgaaaaaccagaagatatcgtgaaattgggcgatattgttaaagttaag
gttatggaaattgacgaaaaaggacgtgtaaacgtatctcgtaaagcattattaccaaaa
ccagaagttaaaaaagaagacgaaaagtctgccgaataa
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