Erysipelothrix rhusiopathiae SY1027: K210_01075
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Entry
K210_01075 CDS
T02688
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ers
Erysipelothrix rhusiopathiae SY1027
Pathway
ers03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ers00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K210_01075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ers03019
]
K210_01075
Messenger RNA biogenesis [BR:
ers03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K210_01075
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Lactamase_B_6
PP_kinase
ODP
Motif
Other DBs
NCBI-ProteinID:
AGN23854
LinkDB
All DBs
Position
206234..207892
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AA seq
552 aa
AA seq
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MDKIRFLALGGLDEDGKNMSVIEINDEIYVVDAGLKYPQTDQLGVEIVIPDLSYLKKNKK
RVKAIFITHGHDDVMGALPYLVKEVNAPVYATPLIALMIEDLFKENKVKNAHIHKIKRNS
RFKIGERRFVAFGLTHSIPDTFGIAIDTDQGYVVHSSEFIIDFDVRNQGFMCDVANISEL
GKKGVFLLTAESVASKRQGFTSPNHRITKRIERVFEETNERILVTLYEQNIYRLIEVIET
AQKFKRKVFFYGEKQRRLMKHLERLNYYHMPKGLEIKPEQFNNDIKDVVVIVSDIGPSVF
NKMGRIAMGEDQLVEVNENDHVIVASPVVPGTEAVAGAMINELYKDGVKVMSLNYKDVMP
MHASVEDLKMMIALLKPKYYVPVKGEYQNLVANASVAVDMGISAGNIVILDNGQVAEFDE
GRLKATSEILKLEDMLIDGKDHLDTSGLVLRDRQTLATDGSIIVGMVINNKTKEILGGPD
VQSRGVIYLKDADNIMKEVGVILEQTILKLVEKHKYDNVTARNEARDVIAKYIYKQTGKR
PMILPVIIEIHI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattcgttttctcgcattaggaggtcttgatgaagatggcaagaatatgtca
gtcatcgagattaatgacgagatttatgtcgtggatgcaggtttaaaatatccacaaact
gatcaattgggcgttgaaattgtaattcccgatttatcatatttaaagaaaaataaaaaa
cgtgttaaagctatctttatcacacacggtcatgatgacgtaatgggtgcactcccttat
cttgtaaaggaagtaaatgcaccggtatatgcaacacctttgattgcactgatgattgaa
gacttgttcaaagaaaataaagtcaagaatgcgcatattcacaaaattaaacgtaacagt
cgttttaaaattggtgagcgtcgttttgtcgcgttcggtttaacgcattcaattccggat
acatttgggattgcaattgatacagatcaaggttatgttgttcattcaagtgaatttatt
attgattttgatgtgcgtaatcaaggttttatgtgtgatgtcgcgaacatctctgaatta
gggaaaaaaggtgttttcttattaacagccgagtctgttgcttcgaaacgtcaaggattt
acttcaccaaatcatcgtattacaaagcgaattgaacgtgtttttgaagagacaaatgaa
cgtattcttgttactttatacgaacaaaatatttaccgacttatcgaagttattgagaca
gcacagaaatttaaacgtaaagtgtttttctacggtgaaaagcaacgccgtttgatgaag
catcttgaacgtcttaactattaccacatgcctaaaggtttagaaattaagccagagcag
tttaataatgatattaaagatgttgtcgtgattgtatccgatattggtccaagtgtgttc
aataaaatgggacgcattgcgatgggggaagatcaacttgttgaagtgaatgaaaacgat
catgtgattgtcgcatctccagttgttcctggtactgaagcggtcgcaggtgcaatgatt
aacgaattgtataaagatggcgtgaaagtgatgtcactcaactataaagatgttatgcca
atgcatgcatcggtagaagatttaaaaatgatgattgcacttcttaaaccgaagtattat
gttccggttaagggtgaatatcaaaatcttgtagcgaatgcgagtgttgctgttgatatg
ggtatcagtgctggtaatatcgtgattttagacaacggtcaagttgcagagtttgatgaa
ggacgtttaaaagctacttcagaaattctgaaattagaagatatgttgattgatggtaag
gatcatttagatacatcaggattagtgctccgtgatcgtcaaacattggcaacggatgga
tcaatcattgtaggtatggtaattaataataaaactaaagaaattttgggcggacccgac
gtgcaatcacgcggtgttatctacctaaaagatgccgataatattatgaaagaagtcggt
gttattcttgaacaaacgattttgaaactcgttgagaagcataaatacgataatgttacg
gcccgtaatgaagctcgtgatgttattgcgaaatacatttacaaacaaacaggaaaacgc
ccgatgattttacctgttattatcgaaattcatatctga
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