Erysipelothrix rhusiopathiae SY1027: K210_08685
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Entry
K210_08685 CDS
T02688
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ers
Erysipelothrix rhusiopathiae SY1027
Pathway
ers03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ers00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K210_08685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ers03019
]
K210_08685
03009 Ribosome biogenesis [BR:
ers03009
]
K210_08685
Enzymes [BR:
ers01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K210_08685
Messenger RNA biogenesis [BR:
ers03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K210_08685
Ribosome biogenesis [BR:
ers03009
]
Prokaryotic type
rRNA helicases
K210_08685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
AAA_19
UTP25_NTPase-like
Terminase_6N
Helicase_RecD
AAA_22
Flavi_DEAD
DUF7390
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGN25300
LinkDB
All DBs
Position
1632615..1634078
Genome browser
AA seq
487 aa
AA seq
DB search
MKNTFKNYGIDDSILKSIQYLGYEAPTDVQQEVIPAVLSGKNIVVQSQTGSGKTASFGIP
ICHQVEWKKRKPQVLVLAPTRELAIQIQEDLFNLGRFKRLKVEALFGRSSFEKQAQRLKE
MTHILVATPGRLLDHMARETVDLSHIETLVIDEADEMFNMGFIDQITSIINRIPKKSQKL
LFSATMPERVKDLCTLYIKNPQWIDIETESRVEDRIDERYYIVDYPDKMALLESVLITEN
PDSSIIFCNTKEQVESVTNFMEDLGCKVDTLHGGMEQRFRTKVLADFKHGLFRYLVATDV
AARGLDIDDVSLVVNFDVPENTESYTHRVGRTARVDKYGKAVTFTSPYEMKFMNLIINDT
DHELQKVVKPGQSLVDARRDAFEAKRDRKPKVKKDKAHDFKQEITKIHINAGKKTKMRPV
DVVGALCSIEGMNAEDIGVISIVDVSTFVEILNGKGDLVLNALKTMPIKGRPRKVNRANK
TEYERLL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatacatttaaaaattatggaattgatgattcaattctaaagtcaattcagtat
ttgggctatgaagccccaacagatgttcaacaagaagtaattccggcagtattaagcggg
aaaaatattgttgtacaatcacaaacaggtagtggaaagaccgcttcatttgggattcct
atttgtcatcaagttgaatggaaaaaacgtaaacctcaagttttagtattagcaccgacg
cgtgaacttgccatccaaatccaagaagatttatttaatcttggtcgttttaaacgcttg
aaggttgaagcgttatttgggcgcagttcatttgagaagcaagcacagcgtttaaaagaa
atgacacacatccttgtcgcaacgccaggtcgcttattggatcatatggcaagagaaacc
gtggatctttcacatattgaaacattagtgattgatgaagctgatgaaatgtttaatatg
gggtttattgatcaaattacaagtatcatcaaccgtattccgaagaagagccaaaaattg
ctcttttccgcgaccatgccagaacgcgttaaagatctctgtacgctttacataaaaaat
ccgcaatggattgatattgaaacagaaagtcgtgttgaagaccgtattgatgagcggtac
tatattgtggattatcccgataaaatggcgttacttgaatccgtacttattacggaaaat
ccagatagttcaatcattttctgtaatacaaaagaacaggtcgaatccgtaaccaatttt
atggaagacttagggtgcaaggtagatactcttcatggcgggatggaacaacgtttccgt
acaaaagtcctagcggactttaaacatggtcttttccgttatcttgttgctacagatgtg
gcggcacgtggattggatattgacgatgtttcacttgttgtgaactttgatgttcctgaa
aacaccgaaagctatacgcatcgtgttggacgtaccgcacgtgtggataaatacggtaaa
gcagtaaccttcacaagtccctatgaaatgaaatttatgaatctaattataaatgatacg
gatcatgaacttcaaaaagttgtgaaaccaggacaaagtcttgtggatgcacgtcgtgat
gcatttgaagccaaacgcgatcgtaaacctaaagtcaaaaaagataaagcacatgacttc
aaacaagagattaccaaaattcatattaatgctggtaagaaaactaaaatgagacctgtt
gatgtggttggagcattatgttccattgaaggcatgaatgcagaagacattggtgttatc
agtattgtggatgtttctacctttgtggagattctaaatggtaaaggggatcttgttctt
aatgctcttaaaacaatgcctatcaaaggtcgacctcgtaaagtaaaccgtgccaataaa
acggaatacgaacgacttttataa
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