Agathobacter rectalis DSM 17629: EUR_09450
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Entry
EUR_09450 CDS
T02587
Name
(GenBank) DEAD_2.
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUR_09450
09124 Replication and repair
03420 Nucleotide excision repair
EUR_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ert03021
]
EUR_09450
03036 Chromosome and associated proteins [BR:
ert03036
]
EUR_09450
03400 DNA repair and recombination proteins [BR:
ert03400
]
EUR_09450
Enzymes [BR:
ert01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EUR_09450
Transcription machinery [BR:
ert03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EUR_09450
Chromosome and associated proteins [BR:
ert03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EUR_09450
DNA repair and recombination proteins [BR:
ert03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EUR_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
HBB
PhoH
Rad4
Motif
Other DBs
NCBI-ProteinID:
CBK90099
LinkDB
All DBs
Position
complement(963052..965520)
Genome browser
AA seq
822 aa
AA seq
DB search
MFSVLKISGVRLKILPEHKTVDIIRNMQGEYMTEAGNNYSEKKTQLHISVRNLVEFIFRE
GDIDNRSSRAMSADAMMEGTRIHRKIQGSMGKEYQAEVPLSLVVEGDLYELTVEGRADGI
FTEDGKCFVDEIKGMYRKVELFEKPVFVHRAQAMCYAYIFALQNNMETIGIQMTYCNLET
EQTKYFREEFSFEEIKKWFDDLMEEYGKWATFQCEMKNQRQASIKELDFPYEYRPGQKKL
VSDVYRTIMRQKLLFMQAPTGVGKTISTIFPAVKAVGEELADRIFYLTAKTITATVAKET
FALLEKNGYRAKTIQITAKEKLCPCDEMECNPVTCPYAKGHFDRVNDAVFDLLHRCEMIE
RDDILSQADRYTVCPFELCLDTASWCDNIICDYNYVFDPNVYLKRFFQEGIKGDYIFLID
EAHNMVERSRQMYSAQIYKEDFLTVKRIMKEHSRSIEKALEKCNKILLGMKRECENYTVY
DTLGNMVFSFMRLMTLLDEFLQKANEFPGKKDVMDFYFELRNFLNIYDLVDEHYVMYSEL
EADGRFMLKLFCVDPSLNIQKRLDKGKSAVFFSATFLPVNYYKSLLSTKKDNYAIYADST
FDSKKRLLAMATDVSTRYTRRSRSEYERIAGYINAVVTQKTGNYMVFFPSYKMMNDVADI
YCEKYADETELMLQKNNMSEAEREEFLDRFSEESDRTLVAFGIMGGIFGEGIDLKNDRLI
GAIVVGTGLPQISNERTILKDYYDAENGCGFDYAFRYPGINKVLQAAGRVIRTTEDTGVI
LLLDERFWQREYDLLYPREWSDRKPCNIANVGKLVADFWEQI
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgtattaaaaatatctggagttagactgaaaatattgccggaacacaaaacc
gttgacataatccggaatatgcagggagagtacatgacagaagctggaaataactatagt
gaaaagaaaacacaattacatatttcggtcagaaaccttgtggaatttattttcagggag
ggtgacatagacaaccggtcatccagagccatgagtgccgatgccatgatggagggaaca
cgcattcacaggaaaatccagggcagcatggggaaggagtatcaggcagaggtgccgctt
tcacttgttgttgaaggtgatttgtatgagctgactgtcgagggcagggcagatggcatc
tttacggaggatggaaagtgttttgttgatgagattaagggaatgtacagaaaggttgag
ctgtttgaaaagccggtttttgtgcaccgtgcgcaggctatgtgctatgcatatattttt
gctctgcaaaataatatggaaacgataggcattcagatgacctactgcaatctggaaacg
gagcagactaagtattttcgcgaggagttctcatttgaagagataaaaaaatggtttgat
gacctgatggaagagtatggcaaatgggcaacgtttcagtgtgaaatgaaaaatcaaaga
caggcttcaatcaaagaactcgattttccatatgagtacagaccggggcagaaaaagctt
gtttcggatgtctacaggacaattatgcgtcagaagcttctttttatgcaggctccgacc
ggtgtgggaaagactatctctactattttcccggcagtgaaggcggttggtgaggagctg
gcagacagaatcttttacctgacagcgaagacgatcaccgcaacagtcgcaaaggaaacg
tttgcgctgcttgaaaaaaatggttacagggcaaaaaccattcagataacggccaaggaa
aagttgtgtccgtgtgatgagatggaatgcaatccggtaacctgtccgtatgcaaagggg
cattttgacagagtaaatgatgcggtttttgacctgcttcacagatgtgaaatgattgag
agggatgatattttatcacaggcggataggtataccgtttgtccgtttgagctttgtctt
gatacggctagctggtgtgataatatcatctgcgattacaactatgtgtttgacccgaat
gtttatcttaagagattttttcaggaggggataaagggagattatatttttctcattgat
gaggctcacaatatggtcgaaagaagcaggcagatgtatagcgctcagatttataaggag
gatttccttactgtgaagcgcattatgaaggagcacagccgttctattgagaaagcgctt
gaaaagtgcaataagatactgcttgggatgaagcgtgagtgtgagaattacacggtatat
gatacacttggcaatatggtattttcctttatgaggcttatgacacttctggatgagttt
ttgcagaaagctaatgagttcccggggaaaaaggatgttatggatttttattttgagctt
cgcaatttcctgaacatttatgatctggtggatgagcactacgtgatgtattccgagctt
gaggctgatggcaggttcatgctaaagcttttttgcgtggacccgtcgcttaatatacaa
aagaggctggataagggcaagtcggctgtgtttttttcggcgacatttttgcctgtaaac
tattacaagagcctgctaagtacaaaaaaggataactatgccatatatgctgacagcacg
tttgacagcaaaaagaggctgcttgcgatggcaaccgatgtgagcacgaggtacacgagg
cgctcaaggagtgagtatgagcgcattgcagggtatattaatgccgttgtcacgcaaaag
acaggaaactatatggttttctttccgtcatataagatgatgaatgatgtggcagatatt
tactgtgaaaaatatgcagacgaaacagagcttatgctgcagaaaaataatatgtcagag
gctgagagggaggaatttctggacaggtttagtgaggaatcggacagaacacttgtggca
tttggcatcatgggaggcatattcggtgagggcattgatttgaaaaatgacagactgata
ggtgctattgttgttggaacgggacttccgcagatcagcaatgagagaactatattaaag
gattattacgatgccgaaaacggctgtggctttgactatgctttcaggtatccgggcata
aataaagtcctccaggcggccggaagagtaatcaggacgacggaggacacaggtgtcatt
ttgctattagatgagagattctggcagagagaatatgatttgctctatccacgcgagtgg
agtgacagaaagccatgcaatatagcaaatgtcggaaaactagttgccgacttctgggag
cagatttaa
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