Agathobacter rectalis DSM 17629: EUR_09840
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Entry
EUR_09840 CDS
T02587
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert00300
Lysine biosynthesis
ert00470
D-Amino acid metabolism
ert01100
Metabolic pathways
ert01110
Biosynthesis of secondary metabolites
ert01120
Microbial metabolism in diverse environments
ert01230
Biosynthesis of amino acids
Module
ert_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EUR_09840
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EUR_09840
Enzymes [BR:
ert01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
EUR_09840
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
KH_PARP14_3
Motif
Other DBs
NCBI-ProteinID:
CBK90138
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Position
complement(1001405..1002262)
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AA seq
285 aa
AA seq
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MKFTKMHGCGNDYVYVNLFEEKLGDPARVSIYVSDRHFGIGSDGLITIGPSDKADFRMRI
YNADGSEAEMCGNGIRCVAKYVYDHKLTDKTEISVETGAGIKYLTLYVEENKVSQVRVDM
GEPILTPGDIPVVKADGSAYGDDYRVIDEPISAGNREWHMTCVSMGNPHAVVFVDDVAGF
ELEKYGPLFENHKMFPKRTNTEFVEILSRNEAKMRVWERGSAETWACGTGTCATVMACIL
NKKTDNKVLVHLRGGDLTIEYIPKTNHVFMTGPATEVFSGEIDII
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacaaaaatgcacggctgtggaaatgattatgtatatgtaaatctttttgag
gagaagttgggtgacccggcaagggtgtcaatatatgtcagtgacaggcattttggaata
ggctcagacggactaatcacaataggtccgtctgataaggcagattttagaatgaggata
tataatgcagacggttcggaagccgagatgtgcggaaacggcatacgctgcgtggcgaaa
tacgtgtatgaccacaaacttactgacaagactgaaatatcggttgagacaggagcaggc
atcaagtaccttacactatatgttgaggaaaataaggtatcacaggtgcgcgtggatatg
ggtgagcctattctgacgcctggggacattccggttgtgaaagcagacggaagtgcttat
ggtgatgactacagggtaatagatgaaccgatttcagcaggcaatagagagtggcacatg
acctgtgtttcaatgggaaatcctcatgcggtagtgtttgtcgatgatgtggcaggtttt
gagcttgagaaatacggtccgctttttgagaatcataagatgtttccaaagcgcaccaac
acggagtttgtagagatactttcaaggaatgaggcgaaaatgagagtatgggagaggggc
agcgctgagacctgggcctgcggtacaggaacctgtgcgaccgtcatggcatgtatactc
aacaaaaagactgacaacaaggtgcttgtgcatctaagaggcggagatctgactatcgag
tatataccaaagaccaatcatgtgtttatgactggacctgctactgaggtcttctcagga
gaaattgatatcatataa
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