Agathobacter rectalis DSM 17629: EUR_13620
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Entry
EUR_13620 CDS
T02587
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert02020
Two-component system
ert02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EUR_13620
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EUR_13620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ert03021
]
EUR_13620
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ert02035
]
EUR_13620
Transcription machinery [BR:
ert03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EUR_13620
Bacterial motility proteins [BR:
ert02035
]
Flagellar system
Flagellar assembly proteins
Stator
EUR_13620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Phage_terminase
UPF0122
Sigma70_r3
GerE
Sigma70_ECF
DUF4143
HTH_38
NirdL-like_HTH
HTH_5
Motif
Other DBs
NCBI-ProteinID:
CBK90460
LinkDB
All DBs
Position
complement(1363792..1364559)
Genome browser
AA seq
255 aa
AA seq
DB search
MKAIEKEKLWEEYQKNPTPKLREQLIIEYAQLVRLVAGRLSMYLGHNVEYDDLVSYGIFG
LIDAIDKFNLEKNVKFETYASLRIRGAILDQIRKMDWIPRTVRQRQRKIDEAIKNIELRT
GKTANDADLAKELSISEDELCSWQSQLKVTNVVSLDEFDESGPEPVMDAAHNSHYAQPEE
IVTQEELKTMLVKSLDNLTEKERRVIELYYYEDLTLKEISNILEVSESRVSQLHTKGLIK
MRKVMGPYMNILTNA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctatagaaaaggaaaagctgtgggaggaatatcaaaagaatcccactcccaag
ctacgggaacagctcataatagaatatgcacagctggtcaggcttgtggcaggacgcctc
agcatgtatcttgggcataatgtggaatatgatgacctggtaagctatgggatatttggc
ctcattgatgccatagacaagtttaatcttgaaaaaaatgtcaagtttgagacatatgca
agccttagaatccgtggagccatacttgatcagatcaggaaaatggactggattccaaga
acagtcagacaaaggcaaaggaaaatagacgaggcaataaagaacattgaacttcgtacc
ggcaaaacagcaaatgacgcagacctcgcaaaggagctttctatctcggaggatgagctt
tgcagctggcagtcgcagcttaaagtaacaaatgttgtatctctcgatgaatttgatgag
tcaggacctgagcctgtcatggatgctgcacataattcacattatgcacagccggaggag
attgttacacaggaagagctgaaaacaatgcttgttaagtcgcttgacaatctgaccgag
aaggagcgtagggttatcgaattatattattatgaggatcttacccttaaagaaataagc
aatatcctagaggtttcagaatcaagagtatcacagcttcacacaaagggactgattaaa
atgcgtaaggtcatgggcccttatatgaatatacttacaaacgcataa
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integrated database retrieval system
