Agathobacter rectalis DSM 17629: EUR_18480
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Entry
EUR_18480 CDS
T02587
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ert
Agathobacter rectalis DSM 17629
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ert03032
]
EUR_18480
03400 DNA repair and recombination proteins [BR:
ert03400
]
EUR_18480
Enzymes [BR:
ert01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EUR_18480
DNA replication proteins [BR:
ert03032
]
Prokaryotic type
DNA Topoisomerases
EUR_18480
DNA repair and recombination proteins [BR:
ert03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EUR_18480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MRJP
PTHB1_hp
Motif
Other DBs
NCBI-ProteinID:
CBK90884
LinkDB
All DBs
Position
complement(1873294..1875549)
Genome browser
AA seq
751 aa
AA seq
DB search
MDRNIDNNVDNNIIQTEYSELMQKSYIDYAMSVIIARALPDVRDGLKPVQRRTLYDMHEL
GIRYDKPYRKSARIVGDTMGKYHPHGDSSIYDAMVVLAQDFKKGMPLIDGHGNFGSIEGD
GAAAMRYTEARLQKITQEAYLADLDKNVVDFIPNYDETEKEPEVLPVKVPNLLINGAEGI
AVGMATSIPPHNFGEVVDGVIAYMKNPDITTAEMMQYIKGPDFPTGGIVANQDDLAAIYE
TGQGKIKIRGRIEIEKGKAGKDKLVITEIPYTMIGANIGKFLNDVYSLVESKATTDIVDI
TNQSSKEGIRIVLELKKGADVEALKNLLYKKTKLEDTFGVNMLAVANGRPETLGLVPIIR
HHVNFQYEIAKRKYETLLAKEQEKEEIQQGLIKACNVIDLIIEILRGSRDQKMAKACLIN
GETEGIKFKSKASEAMAAQLCFTERQAAAILEMRLYKLIGLEIEALIKEHEETRAKIAEY
SDILEHRSSMAKVIMKELKAFRKEYARDRRTELDNLEEAVVVKKELEVSDVVLLMDRFGY
VKTVDTSTYDRNKDTADAENKLILKVKNIDKLCIFTNNGNMHLVKVLDLPYGKFRDKGTP
IDNVSNYDSSKEDIVFIAPLMDVEKHKLIFGTKSAMIKLVDGAEFVVTRKTSQATKLMDD
DELLFVDMLSENATMVMRSKKEMFLRIDCGTIPEKKKAAVGVRGMRLDREDELTDIYLLY
DQEEKEVEVKGKQVALHRLHIANRDTKGVKK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaatatagataacaatgtagacaacaatataattcagaccgaatattcggag
ctgatgcagaaatcatatattgactatgcgatgagtgtcattatagcaagagccctgccg
gatgtgcgcgatgggcttaagcctgtacaaaggcgtacactttatgatatgcatgagctg
ggcatcaggtacgacaagccataccgaaagagtgcgcgtatagtcggtgatacaatgggt
aaatatcatccgcacggcgattcatcaatctatgatgcgatggtcgttttggcacaggac
ttcaaaaagggcatgccgcttatcgatggacacggtaattttggctcaattgaaggagac
ggagccgctgccatgcgttatactgaggcaagacttcaaaaaatcacacaggaagcctac
cttgctgatcttgacaaaaatgtggttgatttcattccaaactacgacgagacagaaaaa
gagccagaggtgcttccggtcaaggtgccgaaccttttgataaatggagctgagggtata
gcagtcggcatggctacaagcattccgccacacaattttggcgaggtggtggacggtgtg
attgcttatatgaaaaatcctgatatcaccactgccgagatgatgcagtatataaaggga
cctgattttccgacaggaggcattgttgcaaatcaggatgatcttgcagcaatatatgag
accggacagggaaagataaaaatccgtggaagaatcgaaatagagaagggtaaggcagga
aaggacaagcttgtcattacggaaatcccatacacaatgattggtgccaatataggaaaa
ttcttaaatgatgtctattcacttgtcgagtcaaaagcgacaacggatattgtggacata
accaaccagtcatcgaaagagggaataagaattgtcttagagcttaaaaaaggtgctgat
gttgaggcacttaagaaccttttgtataaaaagacaaagctggaggacactttcggtgta
aatatgctggccgtcgcaaatggaagacctgagacgcttggtcttgtacccatcataagg
caccatgtcaatttccagtatgagattgcaaaaagaaagtatgagacacttcttgcaaag
gagcaggagaaagaagaaatacagcagggactcataaaggcctgcaacgtgatagatctg
attattgaaatattaagaggaagccgtgaccagaaaatggcaaaggcatgtctcataaac
ggagagacagaggggattaaattcaagtcaaaggcttcagaagccatggcagcccagctt
tgctttactgagcgtcaggcagctgctatccttgaaatgcgtctgtacaagctgattgga
ctcgaaattgaggctctgattaaggagcacgaggagaccagggcaaagattgcagagtac
agcgatattttagagcatcgctcatccatggcaaaggtcattatgaaggagcttaaagcg
ttccgcaaggagtatgcaagggacagacgcacggagcttgacaatctcgaggaagctgtt
gtggtcaaaaaagagcttgaggtatcggatgtagtgctgcttatggaccgcttcggctat
gtgaagacagtagatacttcaacctatgatagaaacaaagatacagctgacgcagagaac
aagctgatattaaaggtcaaaaatatagataagctgtgcattttcacaaacaacggaaac
atgcatcttgtcaaggtgttagacctgccttacggcaaattccgtgacaagggtacacct
attgacaatgtaagcaactatgacagcagtaaggaggatatagtatttatagcacctctt
atggatgttgaaaagcacaagcttatatttggaacgaagtcagccatgataaagctcgtg
gatggtgctgagtttgtggtgacacgaaagacctcgcaggccacaaagctcatggatgat
gatgagctgttgtttgttgacatgctttcagagaatgctacaatggtaatgcgttcaaag
aaggagatgttccttcgaatcgactgtggcactattcctgaaaagaaaaaggcagcagta
ggtgtcaggggaatgaggcttgacagagaggatgagcttactgacatttatctgctttat
gaccaggaggaaaaagaggtcgaggtaaagggtaagcaggtggcgcttcacaggctgcac
attgcaaaccgtgataccaagggcgtgaagaaataa
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