Agathobacter rectalis DSM 17629: EUR_19090
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Entry
EUR_19090 CDS
T02587
Name
(GenBank) recombination helicase AddA, Firmicutes type
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ert
Agathobacter rectalis DSM 17629
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ert03400
]
EUR_19090
Enzymes [BR:
ert01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUR_19090
DNA repair and recombination proteins [BR:
ert03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EUR_19090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
CBK90942
LinkDB
All DBs
Position
complement(1937098..1940760)
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AA seq
1220 aa
AA seq
DB search
MDVKWTSEQKKVIDLRDRDILVSAAAGSGKTAVLVERIVNRICVDNPPVDIDRMLVVTFT
KAAAAEMRERVSRAIDSLKEQKPDDENLQRQSTLVHNALITTIDSFCLFVVQNNFAQLNL
DPDFRIGDQAELKLMLKDALAQVFEDNYAREDNEEFINLIDTYSKGRNDSAVRQMVEDIY
YKAGSSSWPRKWMNSLLRLYDIKSAKQLEDSEIIKEIVDYSRVLLEEAVQELTMAKDLAS
ATPGLEKYALTLSEDIALFDGMADVTGYVGMQEFLNKISFGRIAVIRKFDGDEKKKERVK
SMRDATKKKVDGIKQKYFGMSIELMYEQLERQRPFVKELIRLSLEFYDAMEAVKTRKRVF
DFSDIEHFALRILVDEQTLEPTETAREFSKHFEEIMIDEYQDSNQVQEDILTAISREHQG
VGNMFMVGDVKQSIYRFRMARPELFMEKYNTYTSDDSAHQRIDLHKNFRSRNEVLDFTND
IFYKIMAADLGNVQYDDDAALYPGASYPKETMRPELLLVDYKDEDLSEIIEDEDGDKVQI
EALLIANRIRSLMENGMVTDKKTGQLRAVQYRDIVILSRSVATWGNTVAAVLKDCDIPAH
VESNTGYFSSYEIQVILSMLRILDNPLQDIPMAAVLASPIVGMDDEELAQIRSAFKGVSF
AQAALSAMAGENGYEDEKLKAFALVFERLRGAVADTPIHELLYMMLDETGFYRYASAMPA
GKRRRQNIDMLIEMAAAYEKTSYKGLFHFVRYIDIQQKYEIDYGEADTAGENDDVVRIMT
IHKSKGLEFPVVFVSGLGKGFNTQDTKSDLVIHEKLGLGLVEKTKSPRTKRPSLIRNEIE
SRIKRENLGEELRVLYVALTRAKEKIILTGGLSNAQKSFEKYRGNVNANQPISFGQREGA
GCYLDWVIPAMLSYPDKYTVSTVDATEFAARTAMDMAANDISKAQLIGHISAADETKAKE
LAEEFDFEYAYASDITKKSKYSVSELKHDSMVEKYDSTEREAERPKFLLEEKETYVPDFA
RDDEAGGASNESKELKNAVGVNQGALRGTAVHRVMECLDFKSLCDIDTKDHVAVSAFVKK
SMDEMLKKGLITDDMYRLTRPKLIEQFISSDVAARMAQADKRGDLYKEKPFVMDYEGVLV
QGIIDVFWLENDKIVLLDYKTDRVNAAKELIDRYSTQLKLYADALGRIFSTDGKSIQADE
RLIYSFRLQQTIVICREYKK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaatggaccagtgaacagaaaaaggtaatagatttaagagacagggatata
cttgtatcggcggcagcgggctcaggaaagacagctgtactcgttgagcgtatagtaaac
agaatatgtgtggataatccgccggtggatatcgacaggatgcttgtggtgacgtttacc
aaggctgcagctgctgagatgagggagcgtgtcagccgtgcgatagacagcttgaaggag
caaaagccggacgatgagaacctgcagaggcagtcgacactggttcacaatgcgctcatc
actacaatcgattcgttttgtctgtttgtggtgcagaataatttcgcacagcttaatctg
gatcctgatttcagaatcggtgaccaggcagagcttaagcttatgctaaaggatgctttg
gcacaggtatttgaggacaattatgcaagagaagacaacgaggaatttatcaaccttata
gatacctacagcaaggggagaaatgactctgccgtcaggcagatggtggaggatatctac
tataaggcgggcagctcatcatggccgagaaagtggatgaacagcctcttaaggctctat
gatataaagtcagctaaacagcttgaggactcagagatcattaaggagatagtggattac
agcagggtgcttttggaggaggctgttcaggagcttacaatggcgaaagacctggcatca
gctacacccgggcttgaaaagtatgcgcttacactttcagaggatatagcattgtttgat
ggaatggctgatgtgacaggctatgtcggcatgcaggagttcttaaacaaaatatccttt
ggcagaattgctgtcatcaggaaatttgacggagacgagaagaaaaaggaacgcgtgaaa
agtatgcgcgatgccaccaagaagaaggtagacggaataaagcagaaatactttggcatg
tcaattgagcttatgtatgaacagctggagcgtcaaaggccatttgttaaagagctgata
aggctctcactcgagttttatgatgcgatggaggctgtaaagacaagaaaaagagtattt
gatttttctgatatagagcactttgcgcttcgcatactggtggatgaacagacactggag
cccacagagacagcgcgtgagttttcaaaacattttgaggaaatcatgattgacgagtat
caggactcaaaccaggtgcaggaggatatacttaccgctatttcaagagagcaccaggga
gtcggcaacatgtttatggtgggcgatgtaaagcagagcatatacaggtttcgaatggcg
cgccctgagctgtttatggaaaaatacaacacatatacatcagatgacagtgcacaccag
agaatagacctgcataaaaatttcagaagcaggaatgaggtgttagactttactaacgac
atattctacaaaatcatggcagcagatttgggcaatgtgcagtatgatgacgatgcggca
ctgtatcccggtgcaagctatccaaaggagacgatgcgtcctgagcttttgcttgttgac
tacaaggatgaggatctgtctgaaattatagaggatgaggatggagataaggtgcagata
gaggcgcttttgattgcaaaccgtatcaggagtctgatggaaaacggcatggtgactgat
aaaaagacagggcagctaagagccgtgcagtacagggatatagtgatactttcgagaagt
gttgcaacctggggcaatacagtggcagcagtattaaaggactgtgatattccggcgcat
gtagagtcgaatacaggctacttttcatcgtatgagatacaggtgattctgtccatgctt
cgcatactcgataatccgctgcaggatattccgatggcagcagtgcttgcttcgcctatc
gtgggcatggatgatgaggagctggcacagattaggtctgcctttaagggcgtaagcttt
gcacaggctgcacttagcgccatggcaggtgagaatggctatgaggacgagaagcttaaa
gccttcgctttggtatttgagagactaagaggtgctgtagctgatacgccaatccatgag
cttttgtacatgatgcttgatgagacaggcttttacaggtatgcatcggccatgccggca
ggaaaacggcgcagacagaatatagatatgctgattgagatggccgcagcctatgaaaag
accagctacaaggggctgtttcactttgtcaggtacatagatatacagcagaaatacgag
atagactacggagaggccgataccgcaggcgagaatgacgatgtggtgcgcattatgaca
atccataagagcaagggtcttgagtttcctgtagtgtttgtttccgggcttggcaagggc
tttaacacgcaggacacaaaatcagacctggtgatacatgaaaagcttgggcttggcctt
gtggaaaaaacaaaaagcccaaggacaaagcgaccatcactaatcagaaatgagatagag
agtcgcattaaaagggaaaatctgggagaagagctgcgtgtgctgtatgtagcgctcacc
agggcgaaggaaaagattatcctgacagggggactttcaaatgcccaaaaatcctttgag
aagtatagaggcaatgtaaatgcgaaccagccaataagctttggacaaagggagggagca
gggtgttacctggactgggttatacctgccatgctgtcgtacccggataagtatacggtc
tccacagtcgatgcaacagagttcgctgcacgaactgcgatggatatggcggcaaacgat
atatcaaaagcgcagcttattgggcacataagtgcagcggatgaaacaaaagccaaagag
ctcgcagaggaatttgattttgagtatgcatatgcttctgatataactaaaaaaagcaaa
tattcggtatctgagctgaagcatgactctatggttgaaaagtacgacagcacagagagg
gaggcagagcgtcctaagttcctattggaggagaaggagacgtatgtgccggactttgcg
agggatgatgaggcaggcggtgcttctaatgaaagcaaagagcttaaaaatgcagtaggt
gtgaatcagggagcgctgcgcggaactgcagtgcaccgtgtcatggagtgtctggatttc
aagagcctgtgtgatatagatacaaaagaccatgtggcagtcagtgcatttgtgaagaaa
agcatggatgaaatgctaaaaaaggggcttatcacagatgacatgtacaggctgaccaga
ccaaagcttatagagcagtttatatcatcagatgtggcagcgcgtatggcacaggcggat
aagagaggcgatttgtataaagagaagccttttgtgatggactatgagggtgtgttggtt
cagggaattattgatgtattctggctggagaatgataaaatagtgctgcttgattataag
acagacagggtaaatgctgctaaagagcttatcgacagatacagcacacagctaaaactg
tatgctgatgcacttggaaggattttttctacagatgggaaaagcatacaggcggatgag
aggctcatatattcattccgtttacagcagacaattgttatctgtcgtgaatataaaaaa
tag
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integrated database retrieval system
