Agathobacter rectalis DSM 17629: EUR_19180
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Entry
EUR_19180 CDS
T02587
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert03030
DNA replication
ert03410
Base excision repair
ert03420
Nucleotide excision repair
ert03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUR_19180
03410 Base excision repair
EUR_19180
03420 Nucleotide excision repair
EUR_19180
03440 Homologous recombination
EUR_19180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ert03032
]
EUR_19180
03400 DNA repair and recombination proteins [BR:
ert03400
]
EUR_19180
Enzymes [BR:
ert01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUR_19180
DNA replication proteins [BR:
ert03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EUR_19180
DNA repair and recombination proteins [BR:
ert03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EUR_19180
NER (nucleotide excision repair)
GGR (global genome repair) factors
EUR_19180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
XPG_I
DNA_polI_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
CBK90950
LinkDB
All DBs
Position
complement(1951991..1954702)
Genome browser
AA seq
903 aa
AA seq
DB search
MSEKLVLIDGHSILNRAYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAFDV
HAPTFRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGTLSVR
AEKAGMDVAIISGDRDLLQLATDHVMVRIPKTKKTGTEIENYNTADVIEKYGVTPKEFID
VKALQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVKPPRASKNIVEYWEQAL
MSKELATIILDAPVDYEFSDAKLSGGVESLYTEEAFLLCKRYEFKNMLSRFNVEAPKNNA
EEHFVIVRDLKTAESVFEKAKGREVAFAVVPGESLENSESDGQLSLFSEPVSNDYLAVSI
CFSEEDIYFICTGDEISSSFLDEKLNTLEVKSWISPDLKTNLHRFKSKEIKADDRGRYFD
MMVAAYLINPLVGEYPYDAVAKDYLGLMLSSKKDYLGKLDFTQMMKEDEKKAVDCACYEV
YTAWKSKPVLLQKLKEMDMLTLYRDIELPLVFVLYDMENEGIRADGIKLKEYGDKLAVSI
TELEKKIYEAAGEEFNINSPKQLGVILFEKLGLPNEKKTKTGYSTAADVLEKLAPEYPIV
ADILEYRQLTKLKSTYADGLSGYIASDGKIHTTLNQTITATGRLSSTEPNLQNIPIRIEL
GKLIRKVFLPEEGDLFVDSDYSQIELRVLAALSGDERMIEAFKNGQDIHRSTASLVFDTP
FDEVTDLQRRNAKAVNFGIVYGISAFGLSNDLGISRKEAQGYIDSYFVKYPKIKEFLDQT
VLDAKKNGYTKTMFGRIRPIPELNSSNFMQRQFGERVAMNSPIQGTAADIIKIAMIRVHD
RLLDEGLKSRLILQVHDELLIETKEAEKDKVIKLLEKEMRGAVNMKVSMEVGTECGYDWY
DAH
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagcttgtacttatagacggacacagtattttaaacagggcatatcacggg
ctgcctgatctgaccaattcagagggacttcacacaaatgcagtctatggttttttgaat
atcatgttcaagattcttgacgaggaaaagccagactatctgacggtggcatttgatgtg
catgcgccgacgtttcgccacagaatgtttgatgcgtacaagggcacgagaaagcctatg
gacgaggagctcaggcagcaggtgcctatgataaaggaaatgcttactgccatgggcatt
aaaatcgtggaaaaggaaggctatgaggccgacgatatacttggaaccttatctgtcagg
gcagaaaaggccggtatggatgtcgccataatctccggagacagagacctcttacagctt
gcgacagaccatgtcatggtaaggattccaaagacaaagaaaacaggaaccgagatagaa
aactacaatacagcagatgttatcgaaaagtacggcgtcactccaaaggagtttatcgat
gtaaaggctctgcagggagatacgtctgataatattcccggggtacccggtatcggcgaa
aagacagcaggcgcacttatagcaaaataccactgtatagaggcagtacatgaggacgct
gagaatgtaaagccgccaagggcttcaaagaatatagtggagtattgggagcaggcgctt
atgagcaaggagcttgcgacaatcatacttgatgcgccggttgactatgaattttctgat
gcaaagcttagtggcggagtagagtcactctacactgaggaagcctttttactgtgcaaa
agatacgaattcaaaaacatgctgtcacggtttaacgtggaggctcctaaaaacaatgcc
gaggagcattttgtgatagtaagggacttaaagactgcagagagtgtgtttgagaaggca
aagggcagggaggtcgcttttgcggtagtaccgggagagtctttggaaaacagcgaaagt
gatggacagctaagtctgttttcggagccggtttctaacgattatcttgctgtttcgatt
tgtttttcagaggaggacatttattttatctgtacaggtgatgagatttcaagcagcttc
ctggatgaaaaattaaatactctggaagtaaagtcatggatatcaccggatttaaagacc
aatctgcacagatttaagagcaaagagataaaggcagatgacagaggcagatattttgac
atgatggtggctgcataccttatcaatccgcttgtcggggagtatccctatgatgcggtt
gcaaaggactatctggggcttatgctctcatctaaaaaggattatctgggaaagcttgat
tttactcagatgatgaaggaggatgagaaaaaggcagtggactgtgcctgctacgaggtg
tatactgcctggaaatcaaagccggttcttttgcagaagctaaaggaaatggatatgctc
actctttacagagatatcgagctgccactcgttttcgtactgtatgatatggaaaatgag
ggcataagggctgatggaataaagcttaaggagtatggagacaagcttgctgtttcgata
actgagcttgaaaagaaaatatatgaggcagcaggtgaagagtttaatataaattcgcca
aagcagcttggagtcattctctttgaaaagcttggactgccaaatgaaaagaagacaaag
accggttattctactgcggcagatgtgcttgaaaagctggcaccggagtatccgattgtc
gcggatatattggaatacagacagctcacaaagctaaagagcacatatgctgacggactt
tcgggatatattgcatccgatggcaaaatccatactaccttaaatcagacaatcactgcg
acaggccgtctttcaagcacagagcctaatctgcagaatatcccgataaggattgagctg
ggcaagcttatcagaaaggtatttctgcctgaggagggagatctgtttgttgactcagac
tactcgcagatcgagcttcgggtgctggcagcgctttccggggatgaaaggatgatagag
gcctttaagaatggtcaggatatccacagaagtacagcatcccttgtgtttgacacaccg
tttgatgaggtcacagaccttcaaagacgaaatgcaaaggctgtaaattttggtatcgta
tatggtatcagcgcgtttggtctgtctaacgacctggggatttcaaggaaagaggcacag
ggctatatagacagctattttgtcaaatatccaaagattaaggagtttttggatcagacg
gttttggatgccaagaaaaatggctatacaaagaccatgtttgggcgtatcagaccgatt
cccgagctgaactcgagcaatttcatgcagagacagtttggagagagagttgcaatgaat
tcacctattcagggtacagcagccgatatcataaagattgccatgatacgtgtgcatgac
aggcttcttgacgagggcttaaagtcaagacttatccttcaggtgcatgatgagctttta
attgagacaaaggaagctgagaaggataaagtgattaagcttctggagaaagagatgcgt
ggtgcggtgaacatgaaggtatccatggaggtgggcaccgagtgtggctatgactggtat
gatgcgcattga
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