Agathobacter rectalis DSM 17629: EUR_20880
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Entry
EUR_20880 CDS
T02587
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert03030
DNA replication
ert03430
Mismatch repair
ert03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUR_20880
03430 Mismatch repair
EUR_20880
03440 Homologous recombination
EUR_20880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ert03032
]
EUR_20880
03400 DNA repair and recombination proteins [BR:
ert03400
]
EUR_20880
Enzymes [BR:
ert01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUR_20880
DNA replication proteins [BR:
ert03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EUR_20880
DNA repair and recombination proteins [BR:
ert03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EUR_20880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
GIDE
Motif
Other DBs
NCBI-ProteinID:
CBK91106
LinkDB
All DBs
Position
2148446..2151946
Genome browser
AA seq
1166 aa
AA seq
DB search
MSFCHLHTHTEYSLLDGSNKIKEYVKRVKELGMNSAAITDHGNMYGVVEFYKTAKANDIN
PVIGCEVYVAPNSRFDRETSHGDDRYYHLILLAENNTGYANLMKIVSIGFTEGYYYRPRV
DFETLERYHEGLICLSACLAGEIPRYIVRGFYDEAKEIARKYQDCFGKDNFFLELQDHGI
DDQKLVNQQLLRMSKELEIGLVCTNDVHYTYESDAEAHDVLLCIQTGKKVSDEDRMRYDG
GQFFVKSEEQMRALFPYATEAIENTQKIADRCNVTLEFGNYKIPKYEVPEGYDSAEAFLT
ELCEKGFREKYIGCGEYSDEELKKIHADMDYELGIIKTMGFIEYILIVWDYINWCRTHDC
WVGPGRGSAAGSRVCYCTGITDIDPVKYNLLFERFLNPERVSMPDIDVDFEYAERYRAIE
YVQQKYGHDSVTQIVTFGTMAARGVIKSVGKALDFPYAETDRLAKMVPQELNITIDKALQ
MNPEFKGIYDSDARVHEMIDMAKRLEGLPNHTSVHAAGVVIYPGVASDYVPLGRANDGSP
TAEYNMVQLEELGLLKMDFLGLRTLTVLKDSVKNIKASRGIDVDIDHIDFNDKGTLDFIG
TGKTEGVFQLESAGMQSFMKELSPQSFEDIVAGISLYRPGPMDFIPNYIKGKNNPKEISY
VTPELESILEPTYGCIVYQEQVMQIVQKLAGYTMGQADNIRRAMSKKKQYVIDAERQSFV
YGDKERGIKGCVANGIDEKAANSIYDSMVDFAKYAFNKSHAAAYAKISVQTAWLKNYYPV
EFMAALMTSVIDNSAKAAQYLYSCRDMGIKVLPPDINCGQGEFTAEGDHVRYGMYAIKSL
GRPVIDQIIEERESGGRYRTLSDFIERTCQKELINKRAIENLIKAGACDSLDGTRKQMAM
VYASIVDRVQHDKKSTMAGQMSLFDLVSDEDRQSFELKYPNVGEYDAEEALAYEKEVLGI
YLSGHPLEKYAAALKKNITANAIDFVLEEESGAVKIEDNAHVVIGGMIATKTIKFTKYNQ
AMAFITIEDLTGTVEVIIFPRDYERYQRYLQDDAKIFVIGHATVEDEQNGKIICEKIIPF
DELPKQLWLRFDTMEDYKKNESRLLETIRESDGGDEVIIYIADTKQMKKLGRNYSVNANN
ELMEQLLEFLDKENAKIVEKNIEKMC
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttgtcatcttcacacccataccgagtacagtctgctcgatgggtcaaacaag
ataaaagaatatgtaaagcgcgtcaaggagcttggcatgaactctgccgcaatcacagac
catggcaatatgtacggtgtggtggagttttacaagacggcaaaggcaaatgatatcaat
ccggtcataggctgcgaggtatatgtggcaccaaattcgcgctttgacagggagacaagc
cacggtgatgacaggtattatcatctgattctgcttgctgaaaataatacaggctatgcc
aatctcatgaagatagtgtcaatagggttcacagagggctattattacaggccgagagtg
gattttgagacgcttgagagatatcacgaggggcttatatgcctgtctgcctgtctggca
ggagaaatccccagatacatcgtaagaggcttttatgacgaggcgaaggagattgcaagg
aagtatcaggactgctttggaaaagacaacttcttccttgagctgcaggatcatggcatt
gatgaccagaagcttgtgaatcagcagcttcttaggatgagcaaggagcttgaaataggg
ttagtgtgtactaatgatgtgcactacacctacgagtccgatgcggaggcacatgatgtg
cttttgtgcatccagaccgggaaaaaggtgtctgacgaggacaggatgcgctatgatggc
ggacagtttttcgtaaagagcgaagaacagatgagagcgcttttcccatatgccacagag
gctattgagaatacacagaaaattgccgacagatgcaatgtgacgcttgagtttggcaat
tacaagattccaaagtatgaggtgccagagggctatgatagtgccgaagccttccttaca
gagctttgcgagaagggctttagggagaaatacataggctgtggcgagtacagtgatgag
gagcttaaaaagatacatgcagatatggactatgagcttggtatcataaagaccatgggc
tttatagagtatatccttatcgtgtgggattatatcaactggtgccgcacgcacgactgc
tgggtaggcccgggacgaggctcagcggcgggaagcagggtgtgctattgtaccggaatc
acggatattgatccggttaaatacaatctgctttttgaaagatttcttaaccctgagcga
gtttccatgcctgatatcgatgtggatttcgagtatgcggagagatatcgcgccatagag
tatgttcagcagaagtacggacacgattctgtaacacagatagtcacctttggtacgatg
gcagcaagaggagtcataaaatcagtcggaaaggcgctggatttcccatatgcagagact
gacaggcttgcaaagatggtgcctcaggagcttaatatcacgattgacaaggctcttcag
atgaacccggagtttaagggcatttacgacagtgatgcgagagtgcatgaaatgatagat
atggcaaaaaggcttgagggactgccaaaccacacgtccgtgcatgcagcaggtgtggta
atctatccgggtgtggcgagcgattatgtgcctcttggaagggcaaacgacggaagccct
accgcagagtacaacatggtacagctcgaggagcttggccttttaaagatggattttctg
gggcttcgtacactcacggtgctaaaggattctgtgaagaatatcaaggcatcaaggggc
attgatgtggatatcgaccatattgatttcaacgataagggcacacttgactttatcgga
acaggaaagacggaaggggtattccagctggagtctgccggtatgcaaagcttcatgaag
gaactcagtccacagagctttgaggacatcgtagccggtatttcgctctaccgtccgggt
cctatggatttcattcccaactatataaagggcaagaacaatccaaaggagataagctat
gtgacacctgagcttgagagtattttagagccgacctacggctgtatagtataccaggaa
caggttatgcagatagtgcagaagctcgcaggctatacaatgggtcaggcggacaacatc
cgccgtgctatgagcaagaagaagcagtatgtcattgacgcagaacgccagagctttgtg
tacggagacaaggagcgcggtataaagggctgtgtggcaaacggcatagatgaaaaggct
gccaacagcatatacgattcgatggttgattttgctaagtatgcgttcaacaaatcacat
gcagccgcgtatgcgaaaatcagtgttcagactgcatggctcaaaaattactatccggtc
gaatttatggcagcgctcatgacttctgttatagacaattcagccaaggcggcgcagtat
ctttacagctgtcgtgatatgggtattaaggtgcttccgccggatatcaactgtggacag
ggcgagtttaccgcagagggtgaccatgtcagatatggcatgtacgccatcaaatctctg
ggcaggccggtaatagaccagataatcgaggagcgggaaagtggtggcagataccgcaca
ctctcagattttattgagagaacctgccagaaggagcttatcaacaagcgtgcgattgag
aatctgataaaggcgggagcgtgcgattcactcgacggcacgagaaagcagatggcaatg
gtgtatgcatcgattgtggacagggtgcagcatgacaaaaagtcaacaatggcagggcag
atgagcctgtttgacctggtctcagatgaggataggcagtcatttgagcttaagtatcca
aatgttggtgaatatgacgctgaggaagccctggcctatgaaaaagaggtgcttggcatc
tatttaagcggacaccctctggaaaaatatgcagctgccctaaagaaaaacatcacagca
aatgcgatagattttgtgcttgaagaggagagcggtgccgtaaagatagaggacaatgcg
cacgtggtaatcggaggcatgatagctacaaagacgattaagtttaccaagtacaatcag
gccatggcttttatcacgatagaggacctgacaggaactgttgaggtaattatttttccg
agagattacgagcgctaccagagatatttacaggacgatgctaaaatatttgttatcgga
catgcgacagtcgaggatgagcagaacggcaagataatctgcgagaaaatcataccgttt
gatgagcttccgaagcagctatggctcaggtttgatacgatggaggactataagaaaaat
gagagcaggcttcttgagacaatccgtgaatctgacggaggagatgaagtcataatttac
atcgcagatacaaagcagatgaaaaaacttggcagaaattattccgtaaatgcaaataat
gagctcatggagcagcttttggaatttttagacaaagaaaatgcgaaaattgttgaaaag
aatattgaaaaaatgtgctaa
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