Agathobacter rectalis DSM 17629: EUR_22790
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Entry
EUR_22790 CDS
T02587
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert03410
Base excision repair
ert03430
Mismatch repair
ert03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EUR_22790
03430 Mismatch repair
EUR_22790
03440 Homologous recombination
EUR_22790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ert03400
]
EUR_22790
DNA repair and recombination proteins [BR:
ert03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EUR_22790
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EUR_22790
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EUR_22790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBK91278
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Position
2345356..2347116
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AA seq
586 aa
AA seq
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MAKWYVSAKRADFAAIGAKFGIDQVTARIIRNRGVIGDDAVNEFLNGKISDIADPALLKD
GQRLVDILAQKIADKAKIRIIGDYDIDGVMSTYILVKALKRAGACVDYMIPDRVKDGYGL
NVHLIDKAYEDGIDTVVTCDNGIAAIEEIAHAKELGMTVLVTDHHAVPFEDIKGIKIYKE
SKADAVVNPHQIECSYPYKELCGAAVAWKIVILLYRKIGIDEKETMDFIENVAFATVGDV
MPLTGENRILVKAGLKSIHHTTNIGMKALLECCNIEAENVDAYHFGFVLGPCVNATGRLD
TAKRALELFLCDRQEDAMRIASELVALNDDRKEMTAKGVETAVEIYERDNYEKDRVLVIY
LPNVHESIAGIIAGRIREKYNKPTFILTKSEDGVKGSGRSIEEYSMYEEMCKCSELFTKF
GGHPMAAGLSLPQENVEPFRQKINEYASLTDDDLVPKIHIDVPMPVDYVSMRLVSEFSVL
APFGKDNPKPVFADKNLRVSRMWVVGKNNNVLRLSLISSYGTPINAIYFGDIESFFDYIR
QRFGSDALEAAQRGRFNNIVLSVVYSPKINVFRENESLQFEIQYYK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtggtatgttagtgcgaagagggctgattttgcggcaatcggagcaaagttt
ggaatagatcaggtgacggcgcggataatcagaaacagaggtgttataggagatgacgcg
gtaaatgaatttttaaacggcaaaatctcagacattgcagatccggctcttttaaaggat
ggtcagaggctggttgacattcttgcccaaaagatagctgacaaggccaaaatcaggata
atcggcgactatgatatagacggagtgatgtctacatatattcttgtgaaggcacttaaa
agagccggtgcatgtgtggattatatgattcccgacagagtgaaggatggctatggtttg
aatgtgcatctgattgacaaggcatatgaggatgggatagacactgtggtcacctgtgac
aacggaattgcggcgattgaggaaatagcacatgcaaaggagcttggaatgacggttctc
gtaacagaccaccatgcagtgccttttgaagatataaagggtataaagatttacaaggag
agcaaagcagatgccgttgtaaatccgcatcagatagagtgcagctatccgtacaaggag
ctttgcggagcagctgttgcctggaaaattgtcatattactatatagaaaaatcggcata
gatgagaaagagaccatggattttatagagaatgtggcatttgcaacagtcggtgatgtc
atgccgctgacgggtgaaaaccgtatactcgtaaaggccggtttaaagagtattcatcat
acgacaaatatcggcatgaaagccctgcttgaatgttgtaatatagaggctgaaaatgta
gatgcatatcattttggatttgttcttggaccatgtgtcaatgcaacaggccgtctggat
acagccaaaagagcacttgagctgtttttatgtgacaggcaggaggatgccatgcgcatc
gcatcagagcttgtagcactcaatgatgacaggaaggaaatgactgcaaagggtgtggaa
accgcagttgagatatatgagagggacaattacgaaaaagacagggtgcttgtcatatat
ctgccgaatgtgcatgagagtatagctggaatcatagcgggccgtatcagggagaaatac
aataagccaacctttatactcacaaagagtgaggacggagtaaagggctcaggccgctcg
atagaggagtactccatgtatgaggaaatgtgcaaatgcagtgagctgttcacgaagttt
ggaggccatccgatggctgcagggctttcactgccacaagaaaacgttgagccattccgt
cagaaaataaatgagtatgcatcgcttactgacgatgacctcgtgcctaaaatacatata
gatgtgccgatgccggtggattatgtatcaatgagactggtgtctgagttttcagtactg
gcaccgtttggaaaggacaatccaaagcctgtttttgcggataaaaatctacgtgtgagc
cgcatgtgggtagtgggtaaaaacaacaatgtgcttaggctttctttgatatcctcatat
ggcacgccaatcaatgcaatttattttggtgatatagaaagcttttttgactatatcagg
caaaggtttggttcggacgcgcttgaagctgcacaaagaggaaggtttaataatatagtg
ctgtccgtagtatattcaccaaagataaatgtattcagggaaaatgagtcactgcagttt
gaaatacagtattataagtga
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