Agathobacter rectalis DSM 17629: EUR_23450
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Entry
EUR_23450 CDS
T02587
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ert
Agathobacter rectalis DSM 17629
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ert03009
]
EUR_23450
Enzymes [BR:
ert01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EUR_23450
Ribosome biogenesis [BR:
ert03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EUR_23450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
TRAM
Methyltransf_11
PrmA
Methyltransf_12
N6_N4_Mtase
Methyltrans_SAM
PCMT
Motif
Other DBs
NCBI-ProteinID:
CBK91337
LinkDB
All DBs
Position
2416659..2418074
Genome browser
AA seq
471 aa
AA seq
DB search
MKKGFRGTGTVERVDFPNKGIAVTDDGDRVIVKNTIPGQKVEFVVNKVKHQRAEGRLMEV
IEKSPLETEEPCPHFGMCGGCTYQTVPYEKQLDMKLTQVKKLISDAIGTEEESGYEFIGI
HGSPKKSEYRNKMEFSFGDEYKDGPLALGMHKRGSFYDLVTVSDCQIVDEDFRTILKATL
DYFSKNNIPYFHRATHKGYLRHLLVRKATKTGEIIVDLVTTTQTEGFNEEELLAGFRYAL
LTRHYDGIFKGVLHTKNDSVADVVKNEGTEVLYGDSYFYEELLGLKFKITPFSFFQTNSL
GAEVLYETAREFILGDDKDSLNGKTVYDLYSGTGTIAQLMAPVCKEVVGVEIVEEAVCAA
KENAALNGLDNCKFIAGDVLKVLDEIEEKPDYIILDPPRDGIHPKAIGKIIEYGVENMVY
ISCKPTSLARDLQIFMDRGYRVEKICCVDMFPNTYHVECVIMMQYCGKEKK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggatttagaggaacaggaaccgtagaaagagtagacttcccaaacaaggga
atagccgttacagatgacggcgacagagtaattgtgaaaaatacaattccgggacagaag
gtggaatttgttgtaaataaagtaaagcatcaaagggcagagggcagactcatggaggta
attgagaaatcgcctctggagacagaagagccatgtcctcactttggaatgtgcgggggc
tgtacatatcagacagtgccttacgaaaagcagcttgatatgaagcttacccaggtgaaa
aagctcatttcggatgccatcggtactgaggaagagtcaggatatgagtttatagggata
catggaagtcctaaaaagagcgaatacagaaacaagatggaattttccttcggtgatgag
tataaggatggccctcttgcgcttggcatgcacaaaagaggaagcttttatgaccttgtg
acagtatcggactgtcagatagtggatgaggatttcaggacaatattaaaggcaacactt
gattatttttcaaaaaacaatatcccatatttccacagagcaacacacaagggctatctg
cggcatctgcttgtcagaaaggcaacaaaaaccggtgaaatcatagtagaccttgtcacc
accacacagacagagggcttcaacgaggaggagctgctcgcaggctttagatatgcgctt
ttgaccaggcactatgacggcatatttaagggcgttttacacacaaaaaatgacagcgtg
gcagatgtggtcaaaaacgagggcacagaggtgctctacggagattcatatttctacgag
gagctcttaggtctgaaattcaaaatcacaccattctcatttttccagaccaactcactc
ggagcggaggtgctctatgagacagcgagagagtttatcctgggagatgacaaggattcg
ctaaacggtaaaacagtttacgacctctacagtggaaccggcaccatcgcgcagcttatg
gcaccggtgtgtaaggaagtagtaggtgtcgaaatagttgaggaggcagtttgcgcagca
aaggaaaacgctgcccttaatggtcttgataactgtaaatttatcgcaggtgatgttctc
aaggtgcttgatgagatagaggaaaaacctgattatataattcttgatccaccacgagac
ggtatccatccgaaggctatcgggaaaatcatagagtatggtgttgagaatatggtttat
atttcatgtaaaccgacaagcctggcaagggatttgcagatatttatggacagagggtat
agagtggagaagatatgctgcgtggatatgtttccgaatacttatcacgttgagtgtgta
ataatgatgcagtattgtggaaaagagaagaaatag
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