Agathobacter rectalis DSM 17629: EUR_24000
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Entry
EUR_24000 CDS
T02587
Name
(GenBank) Type IV secretory pathway, VirD4 components
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EUR_24000
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
HerA_C
Motif
Other DBs
NCBI-ProteinID:
CBK91385
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Position
2459724..2461514
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AA seq
596 aa
AA seq
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MQPVVMLVIAGVAMFSVIGGVSLLSHYYTLNGIKSRTVGDGQHGTARFATKKEIAETYVQ
VPYEPELWRRGENLPAAQGLVLGSMERAGKLYALVDTGDVHCLMIGAAGVGKTAHFLYPN
IEYACACGMSFLTTDTKGDLYRNYAGIAKKYYGYHTAVIDLRNPTRSDGDNMLHLVNKYM
DEYLADHTDLSAKAKAEKYAKITAKTIISSGGTDSSSYGQNAFFYDAAEGVLTAAILLIA
EFCPDGKRHIISVFKLIQDLLAPSKVKGKNQFQLLLAKLPDTHKAKWFAGAALNTAEQSM
QSVLSTALSRLNAFLDSELEQILCFDTAIDAELFCKKKTAVFLVMPEEDNTKYFIISLIL
QQLYREILVVADENGGKLNNRVVFYWDEVGTIPKIESAEMMFSASRSRRVSIVPMIQSFA
QLNKNYGKEGAEIIIDNCQDTIFGGFAPNSESAEVLSKSLGSKTVMSGSISRGKNDPSQS
LQMIQRPLMTADELKSLPKGNFIVSKTGTHPMRTKLKLFLKWGITFEEPYESEEKSARKV
AYADKQEIEEEIIRRYMCCMEEPDETPAETARTGGMQQTSLTDTMKKMRQTLRTED
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagtcgtgatgctggtgatcgcaggggtggcaatgttttccgtgattggaggc
gtgtcacttctgtcacactattatacattaaacggaatcaagagcaggactgtcggggac
ggtcagcatggaacggcgagatttgccacgaaaaaggaaatcgcagaaacctatgtgcag
gtgccctatgaaccggagctgtggcgcaggggtgagaacctgccggctgcacagggactg
gtactcggcagcatggagcgggcaggaaaactatacgcactggtggataccggggatgtg
cattgcctgatgattggcgcggcaggagtcggaaagaccgcacattttctgtatcccaac
attgaatatgcctgtgcctgtggaatgagtttcctgaccacggatacaaagggagactta
taccgcaactatgcaggcattgcaaaaaaatactatggctaccatacggcagtcatcgat
ctccgtaatccgaccagaagcgatggtgacaatatgctccatctggtcaacaaatacatg
gatgagtatcttgcagaccatacggacctgagtgctaaggcaaaagcagaaaagtatgca
aagatcacggcaaagaccattatctcctccggtggtacggacagttccagctatggacag
aatgcatttttctatgatgcggcagaaggcgtgctgacggcagccattctgctcattgcg
gaattctgcccggatggaaagaggcatatcatcagcgtgttcaaactgatacaggattta
cttgcaccatccaaagtgaaagggaaaaaccagttccagctacttctggcgaaactcccg
gatacccacaaggcgaaatggtttgcaggggcagccttaaatacggcagagcagtccatg
cagtcggttctctccacagcgttgtccagactgaatgcttttctggattccgagctggag
cagatactctgttttgataccgccatcgatgcagagcttttctgcaaaaaaaagacggcg
gtgtttctggtcatgccggaggaggacaataccaagtattttattatttctctgatttta
cagcagctctaccgggaaattctcgtggtggcagacgagaacggagggaaactgaacaac
cgtgtagttttctattgggatgaggtcggaacgattccgaagattgaaagcgcagagatg
atgttctcagcgtcccgatccagaagggtgagtatcgtacccatgatccagtcctttgcc
cagcttaataagaattatgggaaagagggtgcagaaatcattatcgataactgtcaggat
accatcttcggtgggttcgcaccgaactcggagtcagcggaagtgctctccaagagcctg
ggcagcaaaactgtcatgtccggttccatcagccggggaaagaatgatccgagccagtcc
cttcagatgatccaaagaccactcatgacagcggatgaattgaagtcactgccaaaagga
aactttatcgtatcaaagaccgggactcaccctatgcggacaaaactgaaactgttctta
aaatggggcatcacatttgaagaaccttatgagagcgaagaaaaatctgcaagaaaggta
gcatacgcagacaagcaggagattgaagaggagatcatacggagatatatgtgctgcatg
gaagaaccagacgagacacctgcagaaacggcaaggacaggagggatgcagcagacatcg
ctgacggacaccatgaaaaagatgcggcagaccttacggacggaagattag
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