Ehrlichia ruminantium Welgevonden (South Africa): Erum1400
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Entry
Erum1400 CDS
T00224
Symbol
rho1
Name
(GenBank) transcription termination factor 1
KO
K03628
transcription termination factor Rho
Organism
eru
Ehrlichia ruminantium Welgevonden (South Africa)
Pathway
eru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Erum1400 (rho1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eru03021
]
Erum1400 (rho1)
03019 Messenger RNA biogenesis [BR:
eru03019
]
Erum1400 (rho1)
Transcription machinery [BR:
eru03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Erum1400 (rho1)
Messenger RNA biogenesis [BR:
eru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Erum1400 (rho1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
AAA
AAA_25
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
CAH57856
UniProt:
A0A0H3LZ59
LinkDB
All DBs
Position
241530..242966
Genome browser
AA seq
478 aa
AA seq
DB search
MLSDRKRRVRRTGSRKSNKSATTESSVVLVKEEEVIEGIQSEEEVKVPEDKGGEVKVLDL
SELKKKSIEDLLKIAEELGVVSNGRMLKQEIIFHLMKKVVNDGGAAIGGGVVEILSDGFG
FLRSPEANYAASSDDVYISAGQIKKFNLRTGDIVSGEIRAPSEKERYFTLVKAHSINFTD
MGKLQRYVHFDDLIPLYPEERILLECNDPISLSKKDISMRVIDIVAPLGKGQRALIVAPP
RAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPGYRHV
QLAEIVIEKAKRMVEHRKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQRPKRF
FGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYPAIDI
SKSGTRKEDMLIDHVCLKKVWLLRRLLSSMGSVEAMEFLRDKLSITKDNNEFFDMMNS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgttaagtgatagaaagagacgtgtaagacgtactggtagtaggaaaagtaataaaagt
gctactactgaatcttctgttgttttagtgaaggaagaggaagtaatagagggtatacaa
agtgaagaagaggttaaggtacctgaggataaaggaggagaggttaaggtattagattta
agtgaattaaagaagaagagtatagaggatctgctaaagatagcagaagagctgggtgtg
gtcagtaatggaaggatgctaaaacaggaaataatatttcacttaatgaaaaaagtggta
aatgatggaggagctgcaataggaggtggggtagtagagatattatccgatggctttgga
tttttaagatctcctgaagcaaattatgctgctagtagtgatgatgtatatatttcagca
ggacaaataaagaaatttaatttaaggactggtgatatagtaagtggggagattagagct
ccaagtgagaaagaaagatattttacattagtaaaggcacatagcattaactttacagat
atggggaagctacagagatatgtgcattttgatgacctaatacctttatatccagaagaa
aggatactattagagtgcaatgaccctataagcttaagtaagaaagatataagcatgaga
gtaatagatatagtagcaccgttaggtaaaggacagagggcattgatagttgcgccgcca
agggctgggaaaacaataatattacagcaaatagcgcattcaatatctgtaaatcatcca
gatattgaattaatagtattattaatcggtgaaaggccggaagaagtgacagatatgtgt
agatcagtgaagggtgaagtagtgagttcaacatttgatgagcctggatatagacatgta
cagcttgcagagattgtaatagaaaaggcaaagagaatggtggagcataggaaaaatgtt
gtaatattattagattcaattacaagattagcaagagcatataactctgtaataccttca
tctgggaaggtattaacaggtggggtagattctaatgccttacaaagacctaagagattt
tttggtgctgcaagaaatatagagaatggagggtcattaacaataatagcaactgcactg
attgagacaggatcaaagatggatgaagtaatctttgaggaatttaagggtactggaaat
tgtgaaataatattagataggaaaatatcagataagagagtgtatcctgcgatagacatt
tcaaaatctggtacaagaaaagaagatatgttaatagatcatgtgtgtttaaagaaagta
tggttattgagaagattattatcatctatgggttctgttgaagctatggagtttttaaga
gataagttatcaataacgaaagataacaatgagttttttgatatgatgaatagctag
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