Eulemur rufifrons (Bennett's brown lemur): 138376859
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Entry
138376859 CDS
T11398
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf04140
Autophagy - animal
eruf04142
Lysosome biogenesis
eruf04145
Phagocytosis
eruf04148
Efferocytosis
eruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138376859 (VPS18)
04142 Lysosome biogenesis
138376859 (VPS18)
04140 Autophagy - animal
138376859 (VPS18)
04148 Efferocytosis
138376859 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138376859 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eruf04131
]
138376859 (VPS18)
Membrane trafficking [BR:
eruf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138376859 (VPS18)
Hops complex
138376859 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
WD40_Prp19
zf_RING_Vps8
zf-rbx1
CNH
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
138376859
NCBI-ProteinID:
XP_069317539
LinkDB
All DBs
Position
2:complement(50288643..50297074)
Genome browser
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFAKHRIDFTPSERITSL
VVSSNQLCMSLGKDTLLRIDLGKTNEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRTAEGAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLQDHFL
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtacgaggactcgctctcccgctcggccgtcttgcagccc
ggctgcccgagcgtgggcattccccactctgggtacgtgaatgcccagctggagaaggag
gtacccatcttcgcgaagcatcgcattgactttaccccttccgagcggatcaccagtctc
gttgtttccagcaatcagctgtgcatgagcctgggcaaggacacactgctccgcattgac
ttgggcaagacaaacgaacccaaccatgtggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccatactggctctcacctgctgattgctctgagcagcaccgag
gtcctctatgtgaaccgaaatggacagaaggtacggccactagcacgctggaaggggcag
ctagtggagagtgtgggttggaacaaggcactgggcactgagagcagcacaggccccatc
ctggttgggactgcccaaggccagatcttcgaagcagagctctcagccagcgagggtggg
ctttttggccctgccccagatctctacttccgcccactgtacgtgctaaatgaagaaggg
ggtcctgcgcctgtgtgctcccttgaggccgagcggggccctgatgggcgtggctttgtt
attgccaccactcggcaacgcctgttccagttcataggtcggacagcagagggggctgag
gcccagggcttctcagggctctttgcagcctacacggaccacccacccccattccgtgag
tttcccagcaacctgggctacagtgagttggccttctatacccccaagctgcgctctgca
ccccgggcctttgcctggatgatgggggatggcgtgttgtatggtgcattggactgcggg
cgtcctgactccctgctcagtgaggagcgagtctgggagtacccagagggggtaggtcct
ggggctagcccgcccctagccatcgtcttgacccagttccacttcctgctgctgctggca
gaccgagtggaggcagtgtgcacactgaccgggcaggtggtgctgcaggatcacttcctg
gagaagtttgggccactgaagcacatggtgaaggactcctccacaggccagctgtgggcc
tacactgagcgggctgtcttccgctaccatgtgcagcgggaagcccgggatgtctggcgc
acctacctggacatgaaccgctttgatctggccaaagagtattgtcgagagcggcctgat
tgcctggacacagtcctggcccgggaggctgatttctgctttcgccagcgtcgctacctg
gagagcgcccgctgctatgccctgacccagagttactttgaggagattgccctcaagttc
ctggaggcccgacaggaggaggctctggctgagtttctacagcgaaaactggccagtttg
aagccagctgagcgtactcaggccacactgctgaccacctggctgacagagctctacctg
agccggctcggtgctctgcagggtgacccagaggccctgaccctctatcgggaaacacgg
gagcgcttccgtgccttcctcagcagcccccgccacaaagagtggctctttgccagccgg
gcgtctatccatgagctgctcgccagtcacggggacactgagcacatggtgtactttgct
gtgatcatgcaggactacgagcgggtggtggcataccactgtcagcacgaggcctacgaa
gaggccctggctgtgcttgcccgccaccgcgacccccagctcttctacaagttctcacct
atcctcatccgtcacatcccccgccagctggtagacgcctggatcgagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactacagccagggtggtgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaacgtgctgggggagaccgag
caggccattcacaactacctgctgtctctgtatgcccgcggccagccagcctcactgctg
gcctaccttgagcaggctggggccagcccacaccgggtgcattacgacctcaagtatgcc
ctgcggctctgcgctgagcatggacaccatcgtgcttgtgtccacgtctacaaggtcctg
gagctgtacgaggaggctgtggacctggccctgcaggtggacgtggacttggccaagcag
tgtgcagacctgcctgaggaggatgaggaactgcgcaagaaactgtggctaaagattgca
cggcatgtggtgcaggaggaggaagacgtgcagacggccatggcttgcctggccagctgc
cccctgctcaagatcgaggatgtgttgcccttctttcctgattttgtcaccatcgaccac
ttcaaggaggcaatctgcagctcgcttaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggccacagccagtgcccagcgcatccggcgagacctgcaggagctg
cggggccgctacggcactgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccacatgttccatgctgactgcctgctg
caggccgtgcgacctggcctgcctgcctacaagcaggcccggctcgaggagctgcagcga
aagctgggggctgccccacccccagccaagggctctgcccgggccaaggaggccgagggt
ggggctgctgctgggggacccagccgggaacagctcaaggctgacctcgatgaactggtg
gccgctgagtgtgtgtattgtggggagctgatgatccgctctattgaccggcccttcatc
gacccccagcgctacgaggaagagcatctcagttggctgtag
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