KEGG   Eulemur rufifrons (Bennett's brown lemur): 138385298
Entry
138385298         CDS       T11398                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
eruf  Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03420  Nucleotide excision repair
eruf04120  Ubiquitin mediated proteolysis
eruf05161  Hepatitis B
eruf05170  Human immunodeficiency virus 1 infection
eruf05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:eruf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    138385298 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    138385298 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    138385298 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    138385298 (DDB1)
   05161 Hepatitis B
    138385298 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eruf04121]
    138385298 (DDB1)
   03400 DNA repair and recombination proteins [BR:eruf03400]
    138385298 (DDB1)
Ubiquitin system [BR:eruf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     138385298 (DDB1)
DNA repair and recombination proteins [BR:eruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      138385298 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      138385298 (DDB1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 138385298
NCBI-ProteinID: XP_069327553
LinkDB
Position
6:complement(95098903..95127834)
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccaccgctgtgaacggctgcgtgacc
ggacattttacttcggctgaagatttgaacctgttgattgccaaaaacacgagattagag
atctatgtggtcaccgctgaggggcttcggccggtcaaagaggtgggcatgtatgggaag
attgccgtcatggagcttttcaggcccaagggggagagcaaggacctgctgtttatcctg
actgctaagtacaatgcctgcatcctagagtataagcagagtggcgagagcattgatatc
attacgagagcccatggcaatgtccaggaccgtattggccgcccctcagagactggcatt
attggcatcattgaccctgagtgccggatgatcggcctgcgactgtacgatggccttttc
aaggttattcctctagatcgtgacaataaagagctcaaggcgtttaatatccgcctggag
gagttgcatgtcatcgacgtcaaattcctatacggttgccaagcacctaccatttgcttt
gtctaccaggaccctcaggggcggcacgtaaaaacctatgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatt
gcagtcccagagccctttgggggggccatcatcattggacaggaatcaatcacctatcac
aatggtgacaaatacctggcgattgcccctcctatcatcaagcaaagcacgattgtgtgc
cacaatcgagtggaccctaatggttcaaggtacctgctgggagacatggaaggacggctt
ttcatgctgcttctggagaaggaggaacagatggatggcactgtcaccctcaaggatctc
cgagtggaactccttggggagacctctattgctgagtgcttgacatacctggataatggt
gttgtgtttgttgggtctcgcctgggcgactcccagcttgtgaagctcaacgttgacagt
aatgaacaaggttcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gacatgtgtgtggtggacctggagaggcaggggcaggggcagctggttacttgctctggg
gctttcaaggaaggctccttgcggatcatccggaatggaattggaatccatgagcatgcc
agcattgacttacccggcatcaaaggcttatggccactgcggtctgaacctaaccgtgag
actgatgacactttggtgctctcttttgtgggccagacgagagttctcatgttaaatgga
gaggaggtggaagaaaccgaactgatgggttttgtggacgatcagcagactttcttctgt
ggcaacgtggctcaccaacagcttatccagatcacatcagcatcggtgaggttggtctct
caagaacccaaagctctggtcagtgaatggaaggagcctcagggcaagaacattagtgtg
gcctcctgcaacagcagccaggtagtggtagctgtgggcagggccctctactacctgcag
atccatcctcaggagctccgacagatcagccacacagagatggaacatgaagtggcatgc
ttggacatcacaccattaggggacagcaatgggatgtctcctctttgtgccattggcctc
tggacagacatctcagctcgtatcttgaagctgccctcttttgaactattgcataaggag
atgctgggtggagagatcatccctcgctccattctgatgaccacctttgagagtagccac
tacctcctttgtgccttgggagatggggcacttttctactttgggctcaacattgagaca
ggcttgttgagcgaccgtaagaaggtgactttgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtgaactacatgtgt
cccctcaactctgatggctatcctgacagcctggcactggccaacaacagcaccctcacc
attggcaccattgacgagatccagaagctgcacattcgcacagttcccctctacgagtct
cccaggaagatatgctatcaggaagtgtcccagtgtttcggggtcctctccagccgcatt
gaggtccaagacacaagtgggggcacaactgctctaaggcccagtgccagcacccaggcc
ctgtccagcagtgtcagctccagcaagctgttctccagcagcacagctcctcacgagacc
tcctttggagaagaggtggaggtgcacaacctccttatcatcgaccagcacacctttgaa
gtgcttcatgcccaccagtttctgcagaacgagtatgccctcagcctggtctcctgcaag
ctgggcaaagacccgaacacgtacttcatcgtgggcacagccatggtatatcctgaagag
gcggagcccaagcagggtcgcattgttgtctttcagtattcagatggaaaactacagact
gtggctgaaaaggaagtgaaaggggctgtgtactccatggtggaatttaatgggaagctg
ttagccagcatcaatagcacggtgcggctttacgagtggacgacagaaaaggagctgcgc
accgagtgcaaccactacaacaacatcatggccctctacctgaagaccaagggagacttc
atcctggtgggcgacctcatgcgctcagtgctgctgctggcctacaagcccatggaagga
aacttcgaagagattgctcgagactttaatcccaactggatgagtgctgtggaaatcttg
gatgatgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agcgctgccaccactgatgaggagcggcaacaccttcaggaggttggtctcttccacctg
ggcgagtttgtcaacgtcttttgccacggctctctggtcatgcagaatctgggcgagacg
tccacccccacgcaaggctcagtgctgttcggcacggtcaatggcatgatcggcctggtg
acttcgctgtcagagagctggtataacctcctgttggacatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagattgaacactccttctggagatcctttcacactgagcgt
aagacagaaccggccacaggcttcatagatggcgacttgattgagagtttcctggatatc
agccgccccaagatgcaggaggttgtggcaaacctacagtatgacgatggcagcggtatg
aagcgagaggccaccgcagatgacctcatcaaagttgtggaggagctgactcggatccat
tag

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