Eulemur rufifrons (Bennett's brown lemur): 138386782
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Entry
138386782 CDS
T11398
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eruf04040
]
138386782 (SCN11A)
Ion channels [BR:
eruf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138386782 (SCN11A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
FAM131
Motif
Other DBs
NCBI-GeneID:
138386782
NCBI-ProteinID:
XP_069329560
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All DBs
Position
7:complement(145392832..145474958)
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AA seq
1776 aa
AA seq
DB search
MDDRCYPVIFPDARNFRPFTSDSLAAIEKRLAIQKEKKKSEEQTGAEPQLRPQLDLKASR
KLPKLYGDIPRELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRISVHSLFSMFIICTVIINCVFMAARLGNYSNTDPPELVFTGIYIFEALVKILARGF
ILDEFSFLRDPWNWLDSIVIGTAIVSYLPQFSFRMSSLRTFRVFRALKAISVVSGLKVIV
GALLRSVQKLVNVMILTLFCLSIFALVGQQLFMGGLNQKCIRKDCENISDLEAHDYCFEK
KQNSTEFRMCGNWMVNNACSEQFQCKHTKINPDYSYTNFDNFGWSFLAMFRLMTQDSWEK
LYQQTLRTCGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKMFQE
AQQLLKEEKEALVAMGIDRSSLTSLEVSSFSPKKRKLFGYKKRKSFFFRESRKDQPPGSD
SDEDSSKKPQLLQQTKRLSQNLSVDHFDEHGDPFQRQRALSAVSILTITMQEQEKAQEPC
LPCGKDLASKYLVWDCSPQWLCIKKALRTVMTDPFTELAITICIIINTVFLAMEHHDMNR
DFESMLNTGNLVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVAVLSFADVMNCLSGK
QKWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGHSIGALGNLTVVLAIVVFIFSVVGMQLF
GSKFKSIKSKKFCDTSVPCLRRWHMEDFYHSFLVVFRILCGEWIENMWECMQEAEIPLCV
IVFVLIMVIGKLVVLNLFIALLLNSFSNEERDGNLEGETRKTKVQLALLRFRRAFCFVLH
TLEHFCQKWCRRKNLPKQEVTGSPAADSKDIIPLVTEMKRGPETQEAFGVLTSTPKTLGI
GYDRTWLAPLAEEEDDVESPDEENVQPITQPEAERQTYELHQETKKPTSPGVQSVEIDVF
SVDDTCLAIQNPRKKSDATSMLSECSTIDLQGTFGRLPEMVPTKEPERCFPKGLGCCFPC
CSMDKRKSPCITWWKLRKTCYQIVNHSWFESFIIFVILLSSGALIFEDVNLNKQPKIREL
LNYTDNIFTYIFILEMCLKWVAFGFRKYFTSAWCWLDFIIVIVSVTSLIELNLKYFRTLR
ALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCVNG
TDTNSLIDYKIVADRAQCENGSFSWYNGEVNFDNVGNAYLALFQVATFKGWMDIMYAAVD
SRGKGQQPGFEQNSYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFLTEE
QKKYYNAMKKLGSKKPQKPIPRPLNKCQGVVFDLVTNQVFDIVIISLIILNMISMMAESD
NQPANTKFILERLNLAFVVIFTIECLIKIFALRQYYFINGWNLFDCVIVVLSIVSTMISA
LEHQEHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVM
FIYAIFGMNCFSEVKPGSGIDDIFNFQTFASSMLCLFQITTSAGWDALLKPMLRSENCNS
SPDNCRHLPVIATTYFVSYIIISFLIVVNMYIAVILENFNTATEQSEDPLGEDDFEIFYE
VWEKFDPEATQFIRYSALSDFADSLPEPLRVAKPNKFQFLVMDLPMVSGDRLHCMDILFA
FTTRVLGDSSGLDSMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEERGAAIIQKAFRKYR
KMTKGDLETRPHSPFETLCNGDLSSSGVAKGKAHYD
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtgatcttcccggatgcccgaaatttccgccccttcact
tctgactctctggctgcaattgagaagcggctagccatccaaaaggaaaaaaagaagtct
gaagagcagacaggggcagaaccccagcttcggcctcagcttgacctaaaggcctctagg
aagttgcccaagctctacggcgacattccccgtgagctgatagcaaagcccctggaagac
ttggacccattctacagaaatcataagacattcatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaattcaatcagaagt
ttagccattagaatctcggtccattcgttgttcagcatgttcatcatctgcacggttatc
attaactgcgtgttcatggccgcacggctcggtaactacagtaacacggatcctcccgag
cttgtcttcactgggatttatatttttgaagctttggtaaaaatattggcaagaggtttt
attctggatgaattttctttccttcgagatccatggaactggctggactccattgtcatt
ggaacagcgattgtatcatatttgccacagttcagcttcaggatgtcatcactgcgtacc
ttccgagtgttcagagctttgaaagccatttcagtagtttcaggtctgaaggtcattgtg
ggggccttgctgcgctctgtgcagaaacttgtcaacgtgatgatcctgaccctcttctgc
ctcagcatcttcgccctggtaggtcagcagctcttcatgggaggtctgaatcagaaatgt
atcaggaaggactgtgagaatatcagtgaccttgaagctcacgattattgttttgaaaag
aagcaaaattccactgaattcagaatgtgtggcaactggatggttaacaatgcctgttct
gaacaatttcaatgcaagcacaccaaaattaatcctgactatagttacacgaattttgac
aactttggctggtcttttcttgccatgttccggcttatgacccaagattcctgggagaag
ctttaccaacagaccctgcgcacctgtgggctctattcagtcttcttttttgtggtggtc
atcttcctgggctccttctacctgattaacttaaccctggctgttgtcaccatggcttat
gaggagcagaacagaaatgtagctgcagagacggaggccaaggaaaagatgtttcaggaa
gcccagcagctgctaaaggaggagaaggaggctctggttgccatgggaattgacagaagt
tcacttacttcccttgaagtatcatccttttctcccaaaaagagaaagctctttggttat
aagaaaaggaagtccttctttttcagagagtctaggaaagatcagcctccaggatcagat
tctgatgaagattcctccaaaaagccacagctcctacagcaaaccaaacgactgtcccag
aatctgtcagtggaccactttgatgagcatggagaccccttccaaaggcagagagcactg
agtgctgtcagcatcctcaccatcaccatgcaggaacaagaaaaagcacaggaaccgtgt
ctcccatgtgggaaagacctggcctccaaataccttgtgtgggactgtagcccccagtgg
ctatgcattaagaaggccctgagaactgtgatgactgacccctttactgagctggccatc
accatttgcatcataatcaacactgtctttttggccatggagcatcatgatatgaaccgc
gattttgagtctatgttgaacacagggaatttggttttcactggcattttcatagccgaa
atgtgcctaaaaatcattgcacttgacccctaccactactttcgccgaggctggaacatt
tttgacagcattgttgctgttctgagttttgcagacgtgatgaactgtctctctggaaaa
caaaaatggccattcttgcgctccttcagagtgctgagggtcttcaagttagccaaatcc
tggccaactttaaacacactaataaagataattggccactccattggagcccttggaaac
ctgactgtggtcctagccatcgtggtctttattttctcagtagttggcatgcagcttttt
ggctctaaattcaagtccataaagagtaaaaaattctgcgacacttctgtcccctgttta
cggcgctggcacatggaggatttttaccactccttcctggtggtattccgcatcctttgt
ggggaatggatcgaaaacatgtgggaatgtatgcaggaagctgaaataccattgtgtgtt
attgtctttgtgttgatcatggtgataggaaaacttgtggtgctcaacctcttcattgcc
ttactgctcaattcctttagcaacgaggagagagatggaaacttagaaggagaaaccagg
aaaactaaagtccagttggccctgcttcggttccgccgggctttttgttttgtattacac
actcttgagcatttctgtcaaaagtggtgcaggaggaaaaacttaccaaagcaagaagtg
acaggaagtcctgctgcagacagcaaagacatcattcccctggtcacagagatgaaaagg
ggaccagaaacccaggaggcatttggcgtactaacctctacaccaaagaccttgggcatt
gggtatgatcggacttggctggccccacttgcagaggaagaagatgatgttgaatctcct
gatgaagaaaatgtacagcccatcacacaacctgaggctgaaagacagacctatgaactc
catcaggagaccaagaagcccaccagcccaggagttcaaagtgtggaaattgacgtgttc
tctgttgatgatacttgtctggctatacagaatccccgaaagaagtctgatgctaccagt
atgctttcagaatgtagcaccattgatctgcagggtacatttggacggttacctgaaatg
gttcccacaaaggaaccagagagatgttttcccaaaggcctgggttgctgctttccatgt
tgtagcatggacaagagaaagtccccctgcatcacttggtggaagctgcggaaaacctgc
taccaaatagtgaatcacagttggtttgagagctttattatctttgtgattctgctgagc
agtggggcactgatatttgaagatgttaaccttaataaacaacccaaaatccgagaactc
ctaaattatactgacaatattttcacatatatttttatcctggagatgtgtctgaaatgg
gtggcctttggatttagaaagtatttcaccagtgcctggtgctggctcgacttcatcatt
gtgattgtctctgtgaccagtctcattgagttaaacttgaagtacttccggactctacga
gcgctaaggcctctccgagcactgtcccagtttgaaggaatgaaggtggtggtcaatgct
cttataggcgccatacctgccattctgaatgttttacttgtctgcctcattttctggctc
atattttgtatcctgggagtaaacttcttttctggaaaatttggaagatgcgttaacgga
acagatacaaactcactcattgattataagatcgttgccgaccgagctcaatgtgagaat
ggcagtttctcctggtacaacggggaagtcaactttgacaatgtggggaacgcttacctg
gctctgtttcaggtggcaacatttaaaggctggatggatattatgtatgcagctgttgat
tccagagggaaaggacaacagccagggtttgagcagaattcatacatgtacctttacttt
gtggtttttatcatctttggctcattcttcactctgaatctctttattggtgttattatt
gacaacttcaaccaacagcagaaaaagataagtggccaagacatttttctgacagaagaa
cagaagaaatactataacgcaatgaaaaaattaggatccaaaaaacctcaaaaacccatt
ccaaggcctctgaacaaatgtcaaggtgtcgtgtttgacctagtaacaaaccaagtcttt
gacatcgtcatcataagtctcattatcctaaacatgattagcatgatggctgaatcagat
aaccaacctgcaaacacgaaattcatccttgagcgtctcaacctggcctttgtggtcatc
tttacaatagagtgtctcatcaaaatctttgctttgaggcaatactacttcatcaatggc
tggaatttatttgattgtgtgatcgtggttctttctattgttagtacaatgatttctgcc
ttggaacaccaggagcacattcctttccctccgacgctcttcagagttgtccgcttggct
cggattggccgaatcctgagacttgtgcgtgcagcccgaggaattaggactctcctcttt
gctctgatgatgtctctcccctctctattcaatatcggtcttctactctttctggtgatg
tttatttatgccatttttggtatgaactgtttttccgaagtgaagccagggtctggaatt
gatgacatattcaacttccaaacatttgccagcagcatgctctgtctcttccagataacc
acgtcagcaggttgggatgccctcctcaagcccatgctgcgatccgaaaactgtaattcc
tccccagacaactgtcgccacctccctgtcatagccacaacctactttgtcagttacatc
attatctcctttctcattgttgtcaacatgtatattgctgtgattttagagaacttcaat
acagccactgaacaaagtgaggaccctctgggtgaagatgactttgaaatattctacgaa
gtctgggaaaagtttgacccagaagcaacacagtttatcagatattctgctctttctgac
ttcgctgattccctacctgagcctttgcgtgtcgcaaagccaaataaatttcaattccta
gtaatggacttgcccatggtgagtggagatcgcctccactgcatggatattcttttcgcc
ttcaccactagggtgcttggtgactccagcggcctggatagcatgaaagcaatgatggag
gagaagttcatggaagccaatcctttcaagaagttatatgaacccatagtcaccaccacc
aagagaaaggaagaggaaagaggtgctgctattattcaaaaggcctttcgaaagtatagg
aaaatgaccaagggtgacttggaaaccaggcctcattcaccatttgagactctttgcaat
ggagacttgtccagctcaggggtggccaagggcaaggcccactatgactga
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