Eulemur rufifrons (Bennett's brown lemur): 138386995
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Entry
138386995 CDS
T11398
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eruf04121
]
138386995 (PDZRN3)
Enzymes [BR:
eruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138386995 (PDZRN3)
Ubiquitin system [BR:
eruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
138386995 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
138386995
NCBI-ProteinID:
XP_069329921
LinkDB
All DBs
Position
7:complement(177392736..177619212)
Genome browser
AA seq
1067 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCMAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPSVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLNPYLLPEEHPSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
NVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADCLGIPVDECERFRELLELKCQVKSAA
PYSLYYPSGPLDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RVAEGISCPGGEGAVGTTEAYGPSPKNLLSITEDPEVGTPTYSPSPQELDPGQSLENKER
RGSDGSRSPTPSPKLGGAYLPTLHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLTSSSPSEPPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTT
DDDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMLQSRLDCLKEQQAADDRKEMNILE
LSHKKMMKKRNKKILDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcactc
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaagagggcagctgcccagcgcgctgccgcggtcgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcattctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcggcagggtggtcaagctgcagcagctgcccgag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccagtgggc
cgctgccaggagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggtggccac
tgctgcgcacgggcgctgcgggcgcacaacggcgcgctgcaggctcgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcgggcaagcgagagaagtcgctggtggct
cagctggccgccgcgcagctcgagctgcagatgaccgcgctgcgctaccagaagaagttc
accgagtacagcgcgcgccttgactcgctcagccgctgcatggccgcgccgcccggcggc
aagggtgaagaaaccaaaagcctgactcttgtcctgcatcgggactctggctccctggga
ttcaatattattggtggccggcccagtgtggacaaccaagatggatcgtccagtgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccatcgtggtgcaggtattgaggagaacaccc
aggacaaaaatgttcacgcctccctcagagtcacagctggtggacacgggcacccaaacc
gacatcacctttgaacacatcatggctctcaccaagatgtcctctcccagcccgcccgtg
ctgaacccctacctcctgccggaagagcatccctcagcccatgaatactacgatccaaat
gactacatcggggacatccatcaggagatggacagggaggagctggagctggaggaagtg
gacctctacaggatgaacagccaggacaagctgggcctcacggtgtgctaccggacagat
gacgaagatgacattggcatttatatcagtgagatcgaccctaacagcattgcagccaag
gatgggcgcatccgagaaggagaccgcattatccagataaatgggatagaggtacagaac
cgtgaagaggctgtggctcttctaaccagtgaagaaaataagaacttttcactgctgatt
gcaaggcctgaactccagctggacgagggctggatggacgatgacaggaacgacttcctg
gacgacctgcacatggacatgcttgaggagcagcaccaccaggccatgcagttcacggcg
aacgtgctccagcagaagaagcatgaggaagacggtgggaccacagacacagccaccatc
ttgtccaaccagcacgagaaggacagcggtgtggggcggaccgacgagagcacacgcaac
gacgagagctcggagcaggagaacaacggcgatgacgccaccgcgtcctccaacccgctg
gcggggcagaggaagctcacgtgcagccaggacaccctgggcagtggagacctgcccttc
agcaatgagtccttcatctcggccgactgcaccgacgccgactgcctggggatcccggtg
gacgagtgcgagcgcttccgcgagctcctggagctcaagtgccaggtgaagagcgccgcc
ccctacagcctgtactaccccagcggccccctggacgccggcaagagcgaccccgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcccacaagatgcagcagctgcgcgagcagtaccgcgagtcctggatg
ctgcacaacagcggcttccgcaactacaacaccagcatcgacgtgcgcaggcacgagctc
tcggacatcaccgagctcccggagaagtccgacaaggacagctccagcgcctacaacacg
ggcgagagctgccggagcaccccgctcaccttggagatctcccccgacaactccttgagg
cgagtggccgagggcatcagctgcccgggaggcgaaggggccgtggggaccacggaagct
tacgggccatccccaaagaacctgctgtccatcacggaagaccccgaagtgggcacccct
acctacagcccatcgccccaggagctggaccccggccagtccctggagaacaaagagagg
agaggcagcgacgggagcaggagccccacgcccagcccgaagctgggcggtgcctacctg
cccaccttgcaccactccccgtacaagcacgcgcacatcccggcgcatgcccagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatg
agcctggtgagcatgtgcaaggacctgacctcctccagcccgtcggagccgccgcgcatg
gagtggaaggtgaagatccgcagcgacggcacgcgctacatcaccaagcggccggtgcgc
gaccgcctgctgcgggagcgcgccctcaagatccgcgaggagcgcagcggcatgaccacc
gacgacgacgcggtgagcgagatgaagatggggcgctactggagcaaggaggagcggaag
cagcacctggtgaaggccaaagagcagaggcggcggcgcgagttcatgctgcagagcagg
ttggattgtctgaaggagcagcaggcggccgacgacaggaaggagatgaacatcctcgaa
ctgagccacaaaaagatgatgaagaagaggaataaaaagatcctcgataactggatgacg
atccaagaactcttaacccacggcacaaagtcaccagacggcactagagtatacaattcg
ttcttatcggtgactactgtataa
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integrated database retrieval system
