Eulemur rufifrons (Bennett's brown lemur): 138388369
Help
Entry
138388369 CDS
T11398
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03082
ATP-dependent chromatin remodeling
eruf04714
Thermogenesis
eruf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138388369 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
138388369 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
138388369 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eruf03021
]
138388369 (SMARCA2)
03036 Chromosome and associated proteins [BR:
eruf03036
]
138388369 (SMARCA2)
Transcription machinery [BR:
eruf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138388369 (SMARCA2)
Chromosome and associated proteins [BR:
eruf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138388369 (SMARCA2)
Chromatin remodeling factors
BAF complex
138388369 (SMARCA2)
PBAF complex
138388369 (SMARCA2)
GBAF(ncBAF) complex
138388369 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
138388369
NCBI-ProteinID:
XP_069332544
LinkDB
All DBs
Position
7:225813745..225978290
Genome browser
AA seq
1582 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMSTM
GSADFPQEGMHQMHKPMDGMHDKGIVEDIHCGSMKGAGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLIPGDPQAMSQPNKGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQPQPQ
PQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPSGRPSPAPPAAAQPPAAAVPGPSVP
QPAPGQPSPILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSL
PPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARM
TEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTE
REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHK
QAQAAKEKKKRRRKKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFG
PEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEE
VSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQ
LQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNW
TYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYM
IVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCST
FEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKC
DMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEES
FAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAF
RNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDW
NPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKS
SSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNP
KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA
IEDGNLEEMEEEVRLKKRKRRRNVEKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMN
AIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVD
FKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAK
EEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVS
DFDSDEEQDEHEQSEASGTDDE
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggtgcgatgccccacccagggccttcgccagggcccgga
ccttcccctggaccaattcttggacctagtccagggccaggaccatccccaggttccgtc
cacagtatgatggggcccagtcctggacctccaagcgtctcgcatcctatgtcgacaatg
gggtctgcagacttcccacaggaaggcatgcaccaaatgcataagcccatggatggtatg
catgacaaggggattgtagaagatatccactgtggatccatgaagggcgccggtatgcga
ccacctcacccgggcatgggtcctccccagagtccgatggatcagcacagccagggttac
atgtcacctcacccatctccactgggagccccagagcacgtctccagccctatgtctgga
ggaggcccaaccccaccccagatgccaccgagccagccagggcccctcatcccgggtgat
ccgcaggcgatgagccagcccaacaaaggtccctcgcctttcagtcccgtccagctgcat
cagcttcgagctcagattttagcttacaaaatgctggcccggggccaacccctccccgaa
acactgcagcttgcagtccaggggaaaaggacattgcctggcatgcagcagcagcaacag
cagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagccacagccacag
ccgcagcaacagcagccggcccttgttaactacaacagaccatctggcccggggccggag
ctcagcggcccgagcaccccgcagaagctgccggtgcccgcgcccagcggccggccctcg
cccgcgccccccgccgccgcgcagccgcccgcggccgccgtgcctgggccctcagtgccg
cagccggccccggggcagccctcgcccatcctgcagctgcagcagaagcagagccggatc
agccccatccagaaaccgcaaggcctggacccagtggagattctgcaggagcgggagtac
agacttcaggctcgcatagctcataggatacaagaactggaaaatctgcctggctctttg
ccaccagatttacgaaccaaagcaactgtggagctgaaagcacttcggttactcaatttc
cagcgtcagctgagacaggaggtggtggcctgcatgcgcagggacacgaccctggaaacg
gctctcaactccaaagcatacaaacggagcaagcgccagaccttgagagaagctcgcatg
accgagaagctagagaagcagcagaagattgagcaggagaggaaacgccggcagaaacac
caggaatacctgaacagtattttgcaacatgcaaaagattttaaagaataccatcggtct
gtggccgggaagatccagaagctttccaaagcagtggcaacctggcacgccaacaccgag
agggagcagaagaaggagacggagcggattgaaaaggagagaatgcggagattgatggct
gaagatgaagaggggtatagaaagctgattgatcaaaagaaagacaggcggttagcttac
cttttgcagcagaccgatgagtatgtggccaatctgaccaacctggtttgggagcacaag
caagcccaggctgccaaagagaagaagaagaggaggaggaagaagaagaaggctgaagag
aatgcggaaggtggagagtctgccctgggaccagatggagagccgatagatgagagcagt
cagatgagcgacctccctgtcaaagtgactcacacggaaaccggcaaggtcctatttgga
ccagaagcacccaaagcgagccagctggatgcctggctggagatgaatcctggttacgaa
gttgctcctagatccgacagtgaagagagtgattctgattatgaggaggaggatgaggag
gaagagtccagcaggcaggagactgaagagaaaatacttctggatccaaacagcgaagaa
gtttctgagaaggatgctaagcagatcattgagacagcgaagcaagacgtggatgacgag
tacagcatgcagtacagcgccaggggctcccagtcctactacactgtggctcacgccatc
tcagagagggtggagaagcagtctgccctcctcattaacgggaccctaaagcattaccag
ctccagggcctggaatggatggtttccctgtataataacaatttgaacggaatcttagct
gatgaaatggggctaggaaagaccatacagaccattgcactcatcacttatctgatggag
cacaaaagactcaatggcccctatctcatcattgttcccctttcgactctgtctaactgg
acatacgaatttgacaaatgggctccttctgtggtgaaaatttcttacaagggtactccc
gccatgcgtcgctctcttgtcccccagctacggagtggcaaattcaacgtccttttgact
acttatgagtacattataaaagacaagcacattcttgcaaagattcggtggaaatacatg
atagtggacgaaggccaccgaatgaagaatcaccactgcaagctgactcaggtcttgaac
actcactatgtggcccccaggaggatccttttgactgggaccccactgcagaataagctc
cctgaactctgggccctcctcaacttcctcctccccacaattttcaagagctgcagcaca
ttcgaacagtggtttaatgctccgtttgccatgactggcgaaagggtggacttaaatgaa
gaagaaactatattgatcattaggcgtctgcataaggtgttgagaccatttttgctgaga
agactgaagaaagaagttgaatcccagcttccagaaaaagtggaatatgtgatcaagtgt
gacatgtcagctctgcagaagattctgtatcgccatatgcaagccaaggggatcctcctc
acagatggttctgagaaagataagaagggaaaaggaggtgctaagacacttatgaacact
atcatgcagttgagaaaaatctgcaatcacccatatatgtttcagcacatcgaggaatct
tttgctgaacacctgggctattcaaatggagtcatcaatggggccgagctgtatcgggcc
tcaggaaagtttgagctacttgatcgtattctgccaaaattgagagctactaatcaccgc
gtgctgcttttctgccagatgacgtctctcatgaccatcatggaggattactttgctttt
cggaacttcctttacctgcgccttgacggtaccaccaagtctgaagatcgtgccgctttg
ctgaagaaattcaacgaacctgggtcccagtatttcattttcttgctgagcacaagggct
ggaggcctgggcttaaatcttcaggcggcagatacagtggtcatcttcgacagcgactgg
aatccccatcaggatctgcaggcccaagaccgagctcaccgcatcgggcagcagaacgag
gtccgggtgctgaggctgtgcaccgtgaacagtgtagaggaaaagatcctcgcggcggca
aaatacaagctgaacgtggatcagaaagtgatccaggccgggatgtttgaccaaaagtct
tccagccacgagcggagggcgttcctgcaggccatattggagcacgaagaggaaaatgag
gaagaagatgaggtaccggacgatgagactctgaaccaaatgatcgctcgacgagaagaa
gaatttgatctttttatgcgcatggacatggaccggcggagggaagatgcccggaacccg
aagcgcaagccccgcttgatggaagaagatgagctgccgtcctggattattaaggatgac
gcggaagtagaaaggctgacgtgcgaagaagaggaggagaagatatttgggagggggtct
cgccagcgccgtgacgtggactacagcgatgccctcaccgaaaagcagtggctaagggcc
attgaagacggcaatttggaagaaatggaagaggaagtacggctcaaaaagagaaaaaga
cgaagaaatgtggaaaaggaccctgcaaaagaagatgtggaaaaggctaagaagagaaga
ggccgccctccagctgagaagctgtcaccaaatccccccaaactgacaaagcagatgaac
gctatcatcgacactgtgatcaactacaaagataggtgtaacgtggagaaggtgcccagt
aattctcagttggaaatagaaggaaacagttcagggcgacagctcagtgaagtcttcatt
cagttaccttcaaggaaagaattaccagaatactatgaattaattaggaaaccagtggat
ttcaaaaaaataaaggaaagaattcgtaatcataagtaccggagcctaggcgacctggag
aaagatgtcatgcttctctgtcacaacgctcagacgttcaacttggagggatcacagatc
tacgaagactccattgtcttacagtcagtgtttaagagtgctcggcagaaaattgccaaa
gaggaagagagtgaggatgaaagcaatgaagaggaggaagaggaagacgaagaggagtca
gagtctgaagcgaaatctgttaaggtgaaaatcaagctcaataaaaaagatgagaaaggc
cgggacaaaggaaaaggcaagaaaaggccaaatcgaggaaaagccaaacctgtagtgagc
gattttgacagcgacgaggagcaggatgaacatgaacaatcagaagccagtgggactgat
gatgaatga
DBGET
integrated database retrieval system
