Eulemur rufifrons (Bennett's brown lemur): 138391731
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Entry
138391731 CDS
T11398
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03015
mRNA surveillance pathway
eruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138391731
09123 Folding, sorting and degradation
03018 RNA degradation
138391731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eruf03019
]
138391731
03041 Spliceosome [BR:
eruf03041
]
138391731
Messenger RNA biogenesis [BR:
eruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138391731
mRNA cycle factors
Stress granule specific factors
138391731
Spliceosome [BR:
eruf03041
]
Complex C
Other components
Complex C specific factors
138391731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
138391731
NCBI-ProteinID:
XP_069337765
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All DBs
Position
9:complement(48677556..48679792)
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AA seq
634 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVIEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEKAERAIEKLNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGINLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPIQIAQLRPSPRWTAQRARPHPFQNMPGAIRPAAPRPRFSTMRPASSQVPRVTSTQ
RVANTSTQTMGPRPAAAAATPAVHTVPQYKYAAGVRNPQRHLNAQPPVTMQQPAVHVQGQ
EPLTASVLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIENSELLHMLESPES
LRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcctcgctctacgtgggggacctacacccc
gacgtgatcgaggcgatgctctacgagaagttcagcccggccgggcccatcctctccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtacgtgaacttccag
cagccagcggacgcggagcgtgctttggacaccatgaattttgatgttatcaagggcaag
ccagtacgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtaggtaac
atattcattaaaaatttggacaaatccattgataataaagcactgtatgatacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggttccaagggctat
ggatttgtacactttgagacacaggaaaaagctgaaagagcaattgaaaaactgaatggg
atgcttctaaatgatcgcaaagtatttgttggacgatttaagtctcgtaaagaaagagaa
gcagaactcggagctagggcaaaagagttcaccaatgtttacatcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagtttggccctgccttaagtgtg
aaagtaatgactgatgaaagtggaaaatccaaaggatttgggtttgtaagctttgaaagg
catgaagatgcacagaaagctgtggatgagatgaatggaaaggagctcaatggaaaacaa
atatacgttggtcgagctcagaaaaaagtggaacggcagacggaacttaagcgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtattaacctttatgtgaaaaat
cttgatgatggtattgatgatgaacgtctccggaaagagttttctccatttggtacaatc
actagtgcaaaggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttc
tcttcaccagaagaagccactaaagcagttacagaaatgaatggtagaattgtggccacc
aagccattgtatgtagctttagctcagcgcaaagaagagcgccaggctcaccttactaac
cagtatatgcagagaatggcaagtgtacgagctgtgcccaaccccgtaatcaacccttat
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactatcctcctatccaaattgctcaactaagaccaagtcctcgctggactgctcag
cgtgccagacctcatccattccaaaatatgcccggtgctatccgcccagctgctcctaga
ccacgatttagtactatgagaccagcttcttcccaggttccacgagtcacgtcaacacag
cgtgttgctaacacatcaacacagacaatgggtccacgtcctgctgctgctgcagctact
cctgctgtccacaccgttccacagtacaaatatgctgcgggagttcgtaatcctcaacga
catcttaatgcacagccaccagttaccatgcaacagcctgctgttcatgtacaaggtcag
gaacctttgactgcttccgtgttggcatctgcccctcctcaagagcaaaagcaaatgttg
ggtgaacggctgtttcctcttattcaagccatgcaccctactcttgctggcaaaatcact
ggcatgttgttggagattgagaattcagaacttcttcatatgcttgagtctccagagtct
ctccgttctaaggttgatgaagctgtagctgtactacaagcccaccaagctaaagaggct
gcacagaaagcagttaacagtgccactggtgttccaactgtttaa
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