Eulemur rufifrons (Bennett's brown lemur): 138392163
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Entry
138392163 CDS
T11398
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138392163 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eruf03041
]
138392163 (DHX8)
Enzymes [BR:
eruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138392163 (DHX8)
Spliceosome [BR:
eruf03041
]
Complex C
Other components
Step II factors
138392163 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
S1
Helicase_C
OB_NTP_bind
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
PhoH
Sigma54_activ_2
TsaE
ABC_tran
nSTAND_NTPase5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
138392163
NCBI-ProteinID:
XP_069338754
LinkDB
All DBs
Position
9:39350923..39404768
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AA seq
1233 aa
AA seq
DB search
MAVAVAVAVAGPVIVSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAE
KNTTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDLVVKPKTEKEKLKEL
FPVLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSR
SRDRDRDRDRDRDRDRERNRDRDHKRRHRSRSRSHSRTRERNKGKSRYRSRSRSQSPLKE
RKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL
VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL
VGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKE
EFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQ
AAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPND
IPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGK
TTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSP
ETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLI
VTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPG
DILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK
VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT
GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETL
ITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSV
QNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR
AQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVY
IHPSSALFNRQPECPKNFLPVVAVAVSLEQCPSKLEEFEQRAVRSGLLMNSSEGRGQTSQ
PGESFPRHCFSSNSVFFPSVRFQPSEFYTFFPP
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccgtggccgtggccgtggcggggcccgtaatcgtttcggagccaggcccc
gcggaagaacttgctaaactcgagtatctgtctttggtgtcgaaggtttgcactgagctg
gacaatcacttggggatcaacgacaaggatttagctgaatttgtgatcagtcttgctgag
aaaaataccacctttgatacttttaaggcttctctggtcaaaaatggtgcagaattcacg
gattctcttattagcaacttgctgcgtctcatacaaaccatgcggcctccagcaaaacct
tctaccagcaaagatctggttgttaaaccgaaaactgaaaaggaaaagctgaaggaactc
ttcccagtcctttgccaaccagacaacccttctgtccggaccatgctggatgaggatgat
gtgaaagttgctgtggacgtcctgaaggaactggaagctttgatgcccagtgcagcaggc
caggaaaagcaaagagatgctgagcacagggacaggacgaagaagaagaagcggagccga
agccgagatcgagacagagacagagacagagatcgagatcgagatagagagcgaaaccga
gatagagaccacaagcggagacaccgatcccgctctcggtcacattccaggacccgggag
aggaataaagggaagtctagatatcggtccaggagcagaagtcagagtccccttaaagaa
cggaaggaccgggacaaatatggggagaggaatctggacagatggcgggataaacatgtg
gaccgtcctccccctgaagagcctgccattggggacatttacaatggcaaagttaccagc
atcatgcagtttggatgctttgtgcagctggaaggactacggaagcggtgggaaggcctc
gtgcatatctctgagcttcggcgggaaggccgagtggccaatgtggccgatgtggtgagc
aagggccagagggtcaaagtcaaagtgctgtccttcactgggaccaagactagcctgagc
atgaaggatgtggaccaagagactggagaagatttaaacccaaatcgacggcgaaatctt
gttggggagaccaatgaggagacctcaatgcggaatccggacagacccactcatctctcc
ctcgtcagtgcccctgaagtagaggatgactcactggagcgcaagcgcctcacccgcatc
tctgatccagagaagtgggagatcaaacagatgattgctgccaatgtcctttccaaagaa
gaatttccagactttgatgaagagactggcattctccctaaggtggatgatgaagaagat
gaggacctggagatcgaacttgttgaggaagagcctccattcctgagagggcacaccaag
caaagcatggacatgagccccattaaaattgttaagaacccagatggctccctctcccaa
gcagccatgatgcagagtgccttagccaaagaaaggcgggaactcaagcaggcacagcgg
gaagccgagatggattctattcccatgggactcaacaaacactgggttgatcctctgcct
gatgcggaaggcaggcagattgctgccaacatgaggggcattgggatgatgcctaacgac
attcccgagtggaagaagcatgcctttgggggcaacaaagcttcttatggaaaaaagacc
cagatgtcaatccttgagcagagggagagcctgcccatctacaaactgaaggagcagctg
gtccaggctgtccatgacaatcagatcctgattgttatcggagagacaggatctgggaag
acaacgcagatcacccagtacctggcagaagccggctacacttccaggggcaagattggg
tgtacccagcccagaagagtggcagccatgtcggtggccaaaagagtatcagaagagttt
ggttgttgcttaggccaagaggtgggctacaccattcgatttgaggactgcaccagccct
gaaacagtcatcaagtacatgacagacgggatgttgctcagagagtgcctgattgaccct
gacctcactcagtatgccatcatcatgttggacgaggcacatgagaggacaatccacact
gacgtgctctttggattgttgaaaaagacagttcagaaacggcaggacatgaagctgatt
gtcacctcagccacattggatgcagtgaagttttctcagtatttctatgaagctcccatc
ttcaccatcccaggtcgaacgtatcctgtggaaatactgtacacaaaggagcccgagaca
gattatctggatgccagcctgatcactgtcatgcagatccatttaacggagccaccaggt
gacatcctggtcttcctgactggtcaggaggagattgatactgcttgcgagatcctgtat
gaaagaatgaaatccctgggacctgacgttccagagttaattatcctcccggtgtactct
gccctgcccagcgagatgcagacccgaatctttgacccagctccaccaggcagcagaaag
gttgtgattgccaccaacatcgcagagacatcgctgactatagatggcatctactatgtg
gtggaccctggatttgtgaagcagaaagtttataattcgaagacagggattgaccagctc
gtggtgacgcctatttctcaggctcaggcaaagcaacgagctggcagagctgggagaacg
ggcccagggaagtgttacaggctgtacacggaacgtgcctaccgagatgaaatgctgacc
accaacgtgccagaaatccagagaaccaacttagccagcacagtgctgtcgctcaaggcc
atgggcatcaatgacctgctgtcctttgatttcatggatgccccaccaatggaaactttg
atcacagccatggagcagctgtacacactgggggccctggacgacgagggcctgctcact
cgcctgggccgcaggatggcagagtttcctctggagccaatgctgtgcaaaatgctcatc
atgtctgtgcatctgggctgcagtgaagaaatgctgaccatcgtatccatgctgtctgtg
cagaacgtcttctacaggcccaaggataaacaagcccttgcagatcagaagaaggcaaag
tttcaccagaccgagggggaccacctcaccctactggctgtgtacaactcgtggaagaac
aacaagttctccaacccatggtgctatgagaactttatccaagctcgttccctgcgccgg
gcccaagacattcgcaagcagatgttaggcataatggacagacacaagctggatgttgtt
tcctgtggcaagtccacagtccgagtgcagaaggccatctgcagtggcttcttccgtaat
gctgccaagaaagacccgcaggagggttaccggacgctgatcgaccagcaggtggtctac
atccatccttctagtgctctcttcaacagacagccggaatgcccaaagaatttcctcccg
gtggttgctgtagctgtctcattggagcagtgcccctccaagcttgaagaatttgaacaa
agagctgtgaggagtggcttgctaatgaacagttcagagggcagaggtcaaacatctcag
cctggggagagctttccccgacactgcttctcatccaactctgttttttttccaagtgtg
cgttttcagccctcagagttttataccttcttcccaccgtga
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