Eulemur rufifrons (Bennett's brown lemur): 138392193
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Entry
138392193 CDS
T11398
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
eruf
Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138392193 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eruf03041
]
138392193 (DDX42)
Enzymes [BR:
eruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138392193 (DDX42)
Spliceosome [BR:
eruf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138392193 (DDX42)
Complex B
138392193 (DDX42)
Complex C
U2 SnRNP specific factors
138392193 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
138392193
NCBI-ProteinID:
XP_069338873
LinkDB
All DBs
Position
9:43216666..43253143
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AA seq
934 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQRFHSKPVDSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENTDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPIAGATKAIPGFGNTGNISSAPVTYP
SAAAQGVNNSASGNDSREGIGGGNGKRERYTENRGGSRHNHGESGNRHGDSPRHGDGGRH
GDGYRYPEGSSRYPDGQRHGENRHGGSAGRHGESRGANDGRNGESRKEGCNRESKMDPKV
DSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggtcctggcactaagcggggatttggctttggaggttttgcc
atcagtgctgggaagaaggaggaacccaaactcccacaacagtcccacagtgcctttggg
gcaaccagttcttcttctggttttggaaagtcagctccaccacagcttccttctttctac
aaaattggatctaagcgggccaactttgatgaagaaaacgcctattttgaagatgaggaa
gaagactctagcaatgttgatttaccttatattcctgccgaaaactcaccaacccgccag
cgattccattccaagccagtagattctgacagcgatgatgatcccttggaggcattcatg
gcagaagttgaggatcaggcagctagagacatgaagaggcttgaagaaaaggacaaagaa
agaaaaaacgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgatacatggcagaaaacccaactgctggtgtggttcaagaggaagaggaagacaat
ctggaatatgatagtgatggaaatccaattgcaccttccaaaaaaatcattgatcctctt
cctcccattgatcattcagagattgactatccaccatttgaaaaaaatttttacaatgag
catgaagagataaccaacctcactccacagcagttaatagatctccgacataagctcaat
cttcgggtctctggtgctgcacctcctagaccaggaagtagctttgctcattttgggttt
gatgaacaacttatgcaccagattcggaaatctgagtacacacagcccactccaatacag
tgccagggtgtgcctgtggcgttaagtggtagagacatgattggtattgctaaaacaggc
agtgggaagactgcagcttttatctggcccatgttgattcatataatggaccagaaggaa
ttggaaccaggtgatggaccaatcgctgtgattgtgtgtcctactagagagctttgccag
cagatccatgcagaatgtaagcggtttggaaaagcttataatcttcgatcagtggctgta
tatggaggagggagcatgtgggagcaggccaaggctcttcaggaaggggcagagattgtt
gtgtgtaccccaggtcgactgattgatcatgtgaaaaagaaagctactaatcttcaaaga
gtctcttaccttgtgtttgatgaagcagatcgaatgtttgacatgggatttgagtaccag
gttcgatccatagcaagtcatgtccgtcctgacagacagactctcttattcagtgcaact
tttcggaaaaagattgaaaagttggccagagacatcctgatcgaccctattcgagtggtg
cagggagatattggagaggcgaacgaagatgtgacacagattgtggagattctccattct
gggcctagtaaatggaactggcttacccggcgtctggtggagtttacctcttcagggagt
gtcctcctgtttgttactaaaaaagccaatgctgaagagctagccaataaccttaagcag
gaaggtcataatcttgggctactccatggggacatggatcagagtgagagaaacaaggtc
atttcagactttaagaaaaaggacatcccagtcctggtggccacagatgttgcagcccgt
ggtctggacattccttcaattaagactgtcattaactatgatgtggcacgagacattgat
acccatactcataggattggccgcacaggaagagcgggcgagaagggtgtggcctatacc
ttattgactcccaaggacagcaattttgctggtgaccttgtccgaaacttggaaggagcc
aatcagcatgtttccaaggaactcctagatctggcaatgcagaatgcctggtttcggaaa
tcccgcttcaaaggaggaaaaggcaaaaagctgaacattggtggaggaggcctaggctat
agggaacggcctggcctaggctctgagaacacggaccgaggaaataataatgtaatgagc
aattatgaggcctacaagccctccacgggagctatgggagatcggctgacggcaatgaaa
gcagctttccagtcacagtacaagagtcactttgttgcagccagtttaagcaatcagaag
gctggaagctctgccgctggggcaagtggatggactagtgcagggagcttgaattctgtt
ccaactaattcagcacaacagggccataacagtcctgacagccccatcgccggtgccacc
aaggctatcccaggctttggcaatactgggaacatcagcagtgctccagtgacctaccct
tctgctgcagcccagggagtcaacaactcagcttcagggaacgacagtcgagaagggatt
gggggtggcaatgggaaaagagagagatatactgagaaccggggtggcagccgtcataat
cacggagagagtggcaatcggcacggtgatagcccacgtcacggagatggtggtcgccat
ggagatggataccgctacccagaaggcagcagccgttatcccgatggccagcggcatggg
gaaaacaggcatggcggaagtgcaggccggcatggggagagccggggtgcaaacgatggt
cggaatggggaaagcaggaaagaaggttgtaatcgtgagagtaagatggaccccaaggtg
gacagcagcaagatggacaaggtagacagcaagacagataagacagctgatggctttgct
gtcccggagccacccaagcgcaagaagagtcgatgggacagttag
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