Eulemur rufifrons (Bennett's brown lemur): 138394083
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Entry
138394083 CDS
T11398
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
138394083 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eruf04121
]
138394083 (SLX4)
03400 DNA repair and recombination proteins [BR:
eruf03400
]
138394083 (SLX4)
Ubiquitin system [BR:
eruf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
138394083 (SLX4)
DNA repair and recombination proteins [BR:
eruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
138394083 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138394083
NCBI-ProteinID:
XP_069341802
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Position
14:33981440..34005786
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AA seq
1813 aa
AA seq
DB search
MAFENKILADLRLGSRSHLCAWPKTDCHSSEDQPESLKPGQMMDESDEDFKELCSSFFQR
VKKNGTKEVSGERKAQKASNSTQIRGKLKRTKQAATKSKSLQGPAEKKPRSGSQAPRTKK
QGTTKLQASETAVTVNGEGGVLAPAPNQPVLWERAQTTQTGNQAKTTSRTFQGKPENASK
SNSQPPPSCLTTEVPSPSKPRTAELVLQRMQQFKRAGPKRLKHASEECSLELASEENVPK
GPQEETVSGNGYGSGLPATESDAAMALALQQEFARGGASTHDDSLEDKGLFFCQLCQKDL
SAMSVARREQHVNRCLDEAEKALRPSMPQIPECPICGKPFLTLKSRISHLKQCAVKMEVG
PRLLLQAVRLQTARPEAGGPPASSFSSHVGGVKRKGATNKKEPQKRRKVDEAPSEDLLVA
MALSRSEMEQCPAVPALRLESAFSKRIHPGAEKKSRKKKTPVSPPRLLVQDSETTGRQIQ
ERVALLLSEEAELSSTPPLPASRVLKEELEKASWRLPPPEGKRNFLWESSALTGAWAMES
FYTAGLVPPLVPLRPASGLTQEPVAPLVPPEQSEPGVGGPPALHSTPSVGRSPGDPSPSA
SQREHQALQDLVDLAREGLSASPWPGSGGLAGSGGATGLDLVPSDLPLTGFVLPPEEKHL
ERGSHASLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLHAHKFVLYARCPLLSQYVNNE
GFSAVEDGVLTQRVLLSDVSTEAVLAFLRYLYAADTGLSPHLAPELSSLALRFGMSELAH
LCEQVPLMTDSEGEQWEEKEDKNCESRAENFQELLRSVWVDEDEEADTLLKSKGHKEDRE
KVNEAEMEEIYEFAATQRKLLLGARIPDADEDADHHEDSPVSAHILASVQVNERLEKAEN
MESSEPGREEAPTSWENVRPLQRQPSHREGGAETHEQEAPREAQGHSGSSSPLGGCPLPH
TEDAHDYTQLFSSTPGEFSELSQITSDPEEQGGAVKERGREIPASQQVPPAHPCCFLSQP
PQGGSSSQSHLHPHHTSGSSPLKPQSHSGVSHVASPKSPSPAVLSKQKRDSSVVTLFKEP
GHQKGKECSSMLERKNKAVLISPEKSLSIDLTQTKPDHLSPRAQNSASSVKKEDDIILLL
DSDEELELEQTKIKSVSSDPQEERKVLDTSPKSSELFSVIDVDADQEHSQSPPGREAELW
QEEGEGWPEKRGPVGSRGTPWLFCDRESSPDEDSTTDSSWLVPATPLASRSRDCSSQTQI
TSLRARASVDEVTLHTPAALLRSGEGKEAAPELSVMAPQTLSSCRAPGTPGTSRSRRQVL
RSPSRAQPRHHKLSSPLAPRPTSGGRVHLTGQFPSRSPPGPSLQKPASEVVEVKDSEDEQ
EVASHQAHSSPPLDSDPPVPVDDCYWQVEPLSPIPIDHLNLERTGPLSTSSPSSRAREAL
DSGDGHSPGLLGITPIRGNRAAQRKPPERSSWAGSPGSSRLSFLNSALWDDWDGEEQRSP
EALPVSEPQSPGPAQRPEESETPKGANQKKNLPPKVPITPMPRYSIMETPVLKKELDRFG
VRPLPKRQMVLKLKEIFQYTHQTLESDSEDEIPSSQVPRGAPPSQTHTSETHKPSRTGDR
AQQEATVGPVLQRSKGSAKTKGPRQRKQQPSGSVPPLSTSPAKEAPSGPGGDTQLPASQE
SVATSVDGSDSSFSSQSSSSCEFGAAFESAGEDEGEEGVSASQAAVRAADTEEAVRRYIR
SQPALYRKVLLYQPFELGELQAELKQNGIRVATGKLLDFLDTHCITFTTAAARKEKLQGK
RRHPVGRKKGQRT
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgaaaacaaaatcttagcagacttacgcttgggttcacgttctcacctgtgt
gcgtggcccaagactgactgtcactcctctgaagaccagccggaaagccttaaacctggt
cagatgatggatgagtccgatgaggattttaaagaactctgctccagctttttccaaagg
gtgaaaaaaaatggaaccaaggaagtgtcaggagaaaggaaggcacaaaaagcctcaaac
agcactcagataagaggcaaattgaaaaggaccaaacaagctgctaccaagagcaaaagc
cttcaaggccctgcggagaagaaacctcggtctggcagccaggcccctaggactaaaaag
caagggacaaccaagctgcaagcaagtgaaacggctgtcactgtgaatggggagggaggt
gtgcttgctcctgctccaaatcagcctgtgctctgggaaagagcacagaccactcagaca
ggtaaccaggcaaaaaccacctcaagaactttccaggggaaaccagagaatgcttccaag
agcaactcccagccacctccttcctgtttgacgacagaggtgccaagtccctccaaaccc
cgcacggcagagctggtcctacagcgaatgcagcagttcaagagagcaggccccaagcgt
ttgaaacatgcttcggaagagtgctcccttgaattggcatcggaagaaaatgtcccaaag
ggccctcaagaggagacggtgtcagggaacgggtacgggtctgggctccctgccacagag
agcgatgctgccatggccttggccctgcagcaggagtttgcacggggaggagcgtccacg
cacgacgatagcctggaggacaaggggttgttcttctgccagctctgtcaaaaggacctc
tcagccatgagcgtggcacggagggagcagcatgtgaacaggtgcttggatgaggctgaa
aaggcactgagaccgtccatgcctcagatccccgaatgcccgatttgtggcaaaccgttt
ctcaccttaaagagcagaatcagtcacctgaaacagtgtgcagtgaagatggaggtcggg
ccccgcctcctgctgcaggccgtgaggctgcagacagctcggcctgaagcaggcggccca
ccagcatccagcttcagcagtcacgttgggggtgtgaaacggaaaggagccaccaacaag
aaggagccacagaagaggcggaaggttgatgaggcgccatccgaggacctgctggtggcc
atggctctgtcccgatccgagatggagcagtgtccggctgtgccagcgctcaggctggaa
agtgctttctccaagaggatacacccaggagcagagaagaaaagtcgcaagaagaaaacc
ccggtttcacccccgaggttattggtccaggactccgagaccacaggcaggcagatacag
gagcgagtggccctgctcctttccgaggaagcagaattgtccagcacgccaccgcttcct
gccagcagggttttaaaggaagagttggaaaaggccagctggcgtctgccaccacctgag
gggaagcggaactttctgtgggagagcagcgccctgactggagcctgggctatggagtcc
ttctacacagccggcctggtcccgccccttgtgcccctgcggccggcctcgggcctcacg
caggagcccgtggcgccactggtgccacctgagcagtcagagccgggcgtgggaggacca
cctgctctccacagcaccccctctgtgggccgcagccctggggacccatcaccgtcggcc
agccagagggagcaccaggccctgcaagacctggtggacctggcaagggaggggctgagc
gccagcccatggcctggcagtgggggcctggctggctcgggaggggccacagggttggac
ttggtgcccagtgaccttccactgaccgggttcgtcctgccacccgaggagaagcacctg
gagaggggcagccatgcttcgctctccctcgggttgctggttgctgactttggtgccatg
gtcaacaacccacacctgagcgatgtccagttccagacggacagcggggaggtgcttcac
gcccacaagtttgtgctctatgcccgatgtccgcttctcagtcagtatgtgaacaacgaa
ggcttctctgctgtagaagacggggttctgacccagcgcgtcctgttgagtgacgtgagc
acagaggccgtccttgcattcctgcgctatctctacgctgcggacactggcctgtccccc
cacctggcccctgagctgagctccctggccctcaggtttggcatgagtgagctggctcac
ctgtgcgaacaagtgcctctcatgacagactcagagggcgaacagtgggaggagaaggaa
gataagaattgtgaaagcagagcagagaatttccaagaactcttgaggtcagtgtgggta
gatgaagacgaggaagcagacactttgttgaaatccaagggccacaaagaagacagagaa
aaggtgaatgaagcagaaatggaagaaatttatgaatttgcagctactcagcgaaagctg
ctcctgggggcaagaataccagacgctgacgaggacgctgaccaccatgaggacagtcca
gtctctgcgcatatcctagcgagcgtccaggtcaatgaacggttggaaaaagcagagaac
atggagtcctctgagccaggaagagaggaggccccaaccagctgggaaaacgtgcgacca
ctccagaggcagccttcacacagggaggggggtgcagagacccatgagcaagaggcgccc
agggaggcccagggtcattccggctcctccagccctctggggggctgtccccttccgcac
acggaggatgcccacgattacacgcagctcttttcgtcaactccaggagaattctctgag
ctgtcccagataacaagtgatcctgaggaacagggtggcgctgtcaaggagaggggcagg
gagatccctgcttcccagcaggtgcccccagcgcacccatgctgcttcctgtcccagccg
cctcagggagggagttccagccagtcccatcttcaccctcatcacacaagcgggtcgtcc
ccattgaagccccagtcgcatagtggtgtctcccatgtggcctccccaaaatcaccgtct
ccagctgtgctatcaaagcagaaaagggacagtagtgtcgttacgttatttaaagagcca
ggccaccagaaaggcaaagaatgtagttccatgctggaacgcaaaaataaggcggtcctg
atttccccagaaaaatccctgtccattgacctaacccaaacgaaacctgaccatttgagt
cccagagctcagaactctgcatccagcgtgaaaaaagaagatgacattatccttttgttg
gattcagatgaagagctcgagctagaacaaaccaaaataaagtcagtttccagtgatccc
caagaagaaaggaaagttctagacaccagccccaagtcttctgagctgttttctgtcatt
gacgttgatgcagatcaggaacattcccaaagcccaccaggaagagaagccgagctgtgg
caggaggagggggaggggtggccagagaagcggggccccgtgggcagcagagggaccccc
tggctgttctgtgaccgagagagcagcccggatgaggacagcaccacggactcctcgtgg
ctggtgcctgccaccccactggccagcaggagccgtgactgttcatcccagacccagatc
accagcctcagggccagggcgtcggtggacgaggtgactctgcacacgcctgcagccttg
ttgcgaagtggggaagggaaggaagctgcaccggagctgtcagtaatggcgccccagaca
ctgtcatcgtgccgtgcccccggcactccaggaacttctcgcagcagaaggcaggtcctc
agaagcccttcccgtgcccagccccggcaccacaagctctcctccccgctggcccctcgg
cccacctcaggaggccgtgtccatctcaccgggcagttcccgagtcgctcgccgccgggg
ccgagcctgcagaagccggcgagcgaagtggtggaggttaaggatagtgaagatgagcag
gaggtggcctcccaccaggcacacagcagccccccgctggacagcgaccccccagttcct
gttgacgactgctactggcaagtggagcccctctcaccgattccaatcgaccacttgaac
ctcgagcggactggccccctgagcaccagcagtcccagcagccgggcgagggaggccctg
gacagcggtgatggccactccccggggctcctgggtatcacccccatccgaggaaaccgt
gctgcccaaagaaaacctccggagagatcctcatgggccggctccccgggcagcagcagg
ctgagcttcttgaattcagctctgtgggacgattgggatggggaagagcagaggtctcca
gaggctcttcctgtgtccgagccacaaagccctggtccagctcagaggcccgaagagtca
gagacacccaaaggtgctaatcagaagaagaacctgcccccaaaagtgcccataactcca
atgccaaggtattccatcatggagaccccggtgctgaagaaagaactggacaggtttgga
gtccgccctctgcccaaacgccagatggttctgaaactgaaggagatattccagtacact
caccagaccctggagtccgactctgaggatgagatcccgtcctcacaggtgccacgaggg
gcgcctcccagccagacccacacctctgagacccacaagccttcaaggacaggagaccgt
gcccagcaggaagccactgtgggccccgtgctccaaaggtccaagggatctgctaagacc
aagggcccacggcagcgaaagcagcagcccagtgggagcgtcccgcccctgagcacgtca
ccagccaaggaggctccttcaggccctggtggcgacacccagctcccagcctcccaggaa
tctgtggccacctctgtggacggcagtgacagctccttcagctcacaaagttcttcctcc
tgtgagtttggagcagccttcgagtctgcaggtgaagacgagggcgaggagggggtcagc
gcgtcgcaggcggccgtccgggcggcagacacggaggaggcggtgagacgctacatccgc
tcccagccggccttgtaccggaaggtgctgctgtaccagcccttcgagctgggggagctg
caggcggagctgaagcagaacggcatccgcgtggccacgggcaagctgctggacttcctg
gacacgcactgcatcaccttcaccaccgccgcggcccgcaaggagaagctccaggggaag
aggcggcatcccgtgggcaggaagaaagggcagcggacttga
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