Eulemur rufifrons (Bennett's brown lemur): 138395618
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Entry
138395618 CDS
T11398
Symbol
SKIC2
Name
(RefSeq) superkiller complex protein 2 isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138395618 (SKIC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eruf03019
]
138395618 (SKIC2)
Enzymes [BR:
eruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138395618 (SKIC2)
Messenger RNA biogenesis [BR:
eruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138395618 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
138395618 (SKIC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
HAS-barrel
DUF3516
Motif
Other DBs
NCBI-GeneID:
138395618
NCBI-ProteinID:
XP_069344565
LinkDB
All DBs
Position
15:2728002..2739025
Genome browser
AA seq
1246 aa
AA seq
DB search
MMETERLVLPPPDPLDLPLRAVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAALGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPVSQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE
KDLLTVPPGFKKGVDFAPKDHPTPAPGLLSLSRLLEPLDLSGGDEDESEAVGQPAGPRGD
TVSASPCRVPLARASSLEDLVLKEASTAVSTPEPPKPPPQEQWAIPVDVTSPVDDFYRLI
PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAAEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKRLGALEEPDVTGQLADLPEYYSWGEELTETRHMIQRRIVESVNGLKSLS
VGRVVVVKNQEHHSTLGVILQVSSNSISRVFTTLVLCDKPASQDPQDGGPATPDVPHPDD
LVGFKLFLPEGPCDHTVTKLQPGDVAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAA
VTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVYSPRF
PAQYLKLRERMRIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVQA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagactgagcgactcgtgctacctcccccagatcccctggacctgccccttcgg
gccgtggagctgggatgcacagggcgctgggagctcctgaacgtgcctggggctccagag
agcacacttccccatggcctccctccctgtgccccagatctgcagcaagaagcagagcag
ttgtttctgtcgtccccagcctggctgcctctgcatggtgtggagcactcagcccgaaaa
tggcagaggaagacagatccctggtctctcctggctgccctgggggcccctgtcccatct
gacctacaggcccaaagacacccaaccacaggccagatactgggctacaaggaggtcttg
ctggagaacacaaacctctctgccacgacttccttgtctcttcgccggcctccagggccg
gtctcccagtccctgtggggaaatccaacacagtaccccttctggccaggtgggatggac
gaacccaccataaccgatctgagcactcgggaggaggctgaggaggagatagactttgag
aaagatcttcttactgttccacctggtttcaagaagggcgtggactttgcaccaaaagat
caccccactccagctcccgggttgctcagcctcagccgtctgctggagcctctagatttg
agtggaggtgatgaggatgagagtgaggcagtgggacagccagcaggtcccagaggggac
actgtttcagcctctccctgccgtgttcccctggcccgagcaagcagcttggaggactta
gtgttgaaggaagcctccacagctgtatccaccccagagcccccaaaacctccacctcag
gagcagtgggccattcccgtggatgtcacctcccctgtggatgatttctaccgcctcatt
ccccagccagccttccagtgggcgtttgagccagatgtgtttcagaaacaggccatcctg
cacttggagcggcatgattctgtctttgtcgcagctcacacatctgcggggaagacagtc
gtggctgaatatgccattgccctggcccagaaacacatgactcgcaccatctacacttcg
cccatcaaggccctcagcaaccagaagttccgggacttccggaacacgttcggggacgtg
gggctgctcactggggacgtgcagctgcacccggaggcctcctgcctcatcatgaccaca
gagatccttcgctccatgctgtacagcggctcagatgtcatccgggacctggagtgggtc
atctttgatgaggttcactacatcaacgatgctgagcgtggggtcgtgtgggaggaggtg
ctcatcatgctgcctgaccacgtctccatcatcctgctgagtgccaccgtccccaacgcc
ctcgagtttgctgactggattgggcgactgaagcgtcgccagatctacgtgatcagcacc
gttgcccgccccgtccccctggagcactatctcttcacagggaacagccccaagacccag
ggggagctcttcctgttgctggactcccgaggagccttccacacaaaagggtactacgca
gctgcggaggccaagaaggagaggatgagcaaacatgcccagacctttggggccaagcag
cccacgcaccagggggggcctgcacaggaccgtggagtgtacctgtccctcctggcttct
ctccgcacgcgtgcccagctgcctgtggtggtgttcaccttctcccggggccgctgtgat
gagcaggcctcgggcctcacttcccttgacctcaccacaagttcagagaagagtgagatt
cacctcttcctgcagcgctgccttgctcgcctccgtggctctgaccgccagctgccccag
gtcctgcacatgtcagagctcctgcaccgaggcctgggtgtgcaccacagtggcatcctg
cccatcctcaaggagatcgtggagatgctcttcagccgcggcctggtcaaggtcttgttt
gccacggagaccttcgccatgggtgtaaacatgcccgcccgtaccgtggtgtttgactcc
atgcgcaagcacgatggctctaccttccgggacctgctccccggggagtatgtgcagatg
gcaggccgggcggggcgcaggggcctggaccccacaggcaccgtcatcctgctctgcaag
ggccgcgtgcctgagatggcagacctgcaccgcatgatgatggggaagccgtcccagctg
cagtcccagttccgcctcacatacactatgatcctcaacctgctacgggtggatgctctc
agggtggaggacatgatgaagaggagcttctctgagtttccatcccgcaaggacagcaag
gcccatgaacaagctctggctgaactgaccaagaggctgggggccttggaggagcctgac
gtgactggccaactggccgacctgcctgagtattacagctggggggaggaattgacagag
acccggcacatgatccagagacgcatcgtagagtctgtgaatgggctgaaatctctctca
gtgggaagagtggtggtggtgaagaatcaggagcatcacagcactctgggtgtgatcctg
caggtctcctcaaactccatcagcagagtattcacaaccctggtcttgtgtgataagccc
gcgtctcaggacccacaggatggggggccagccactccagatgtcccccacccagatgac
ctcgtgggattcaagctgttcctgcctgaagggccctgtgaccacactgtgaccaagctc
cagccaggagacgtggctgccatcaccaccaaggtgctccgggtgaatggagagaagatc
ttggaggacttcagcaagaggcagcagccgaaattcaagaaggatcctcccctcgcagct
gtgaccactgctgtccaggaactgctgcgcctggcccaggcctacccagcaggacccccc
accctcgatcctgtcaacgacctgcagctcaaggatgtgtcagtcgtggagggtgggctc
cgggctcggaagctagaggagctgatccggggggctcagtgtgtgtacagcccccgtttt
cctgcccagtacctgaagctgcgggagcgaatgcggatacagaaggagatggagcggctg
cgattcctactgtcggatcagtcgctgctgctgctccccgagtaccaccagcgagtggag
gtgctccgaaccctgggttatgtggatgaggcgggtaccgtgaagctggcagggcgggtg
gcttgtgccatgagcagccatgagctgctccttactgagctcatgtttgacaacgcactg
agcgccctgcggcctgaggagatcgcagccctgctctccgggctggtctgccagagccct
ggggaccctggggatcagctcccgagcaccctcaagcagggagtagaacgtgtccaggct
gtggccaagcgcattggtgaggtccaggtggcctgtggcctgaaccagacagtggaggaa
tttgttggggagctgaattttgggctggttgaggttgtgtacgagtgggcccggggcatg
cccttctctgagttggcagggctctcgggaacccccgaaggcctggtggtccgctgcatc
cagcgcctggctgagatgtgccgctcgcttcggggggcagcccgcctggtaggagagcct
gtgctgggtgccaagatggagacagcagctaccctgctacggcgcgacatcgtctttgca
gccagcctctacacccagtga
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integrated database retrieval system
