Eulemur rufifrons (Bennett's brown lemur): 138395904
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Entry
138395904 CDS
T11398
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138395904 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eruf03041
]
138395904 (DHX16)
Enzymes [BR:
eruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138395904 (DHX16)
Spliceosome [BR:
eruf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138395904 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
SecA_DEAD
nSTAND3
Flavi_DEAD
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
138395904
NCBI-ProteinID:
XP_069345083
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All DBs
Position
15:complement(1615929..1631334)
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AA seq
1044 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDVSGPAR
DFALRLWNKVPRKVVVEKPARAAEREARALLEKNRSYKLLEDSDDSSEETVDRAGSSLQK
KRKKRKHLRKKHQEEEEEEEEEASEKGKRRTGGSNQQTGKPESEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEFLFGDVELSRHEQRELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVL
EEEETIEFVRATQLQGDEEPSAPSPSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQV
LIIEGETGSGKTTQIPQYLFEEGYTRKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEV
GYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIK
DVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVV
SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA
RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA
SANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMH
FDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCS
EEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQW
CYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRS
GYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK
AKELEDPHSKKMPKKIGKTREELG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcgggcctggagcgttgggttcaggacgagctgcactcggtgctgggg
ctgagcgagcggcacgttgctcagttcctgatcgggaccgcgcagcgctgcgcctctgcc
gaggagttcgtgcagcgcctacgagacaccgataccttggacgtcagcgggccggcccga
gacttcgccctgagactctggaacaaggtaccacggaaagtggtggtagaaaagccagct
cgggcggcagagcgagaggcccgagccctgctggagaagaaccgatcttataagttgctg
gaagacagtgacgacagcagtgaggagactgtggatagagctgggagcagcctccagaag
aagcgtaaaaaacggaagcacctcaggaaaaagcaccaggaggaagaggaagaagaggag
gaagaagcttctgagaaagggaagaggaggacaggggggagtaatcagcagacagggaag
ccagagtcggaggatgagtgggaacggacagagcgagagcgccttcaggacctggaggaa
cgtgatgcctttgcagagcgggttcggcagcgggacaaggatcggactcgtaatgtcctg
gagcggtcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggctgaggaa
gaccggaaagccatggtccctgagctgcggaagaaatcccgacgagagtacctggctaag
cgggagcgagagaagcttgaggacctggaggcagagctggctgatgaggagttccttttt
ggggatgtggagctgagccggcatgagcagagggagctcaaatataagcgccgtgtgcgg
gatctggcccgggagtaccgggccgctggggagcaggagaagctggaggccaccaatcgc
taccacatgcccaaggagacccgaggacagccagctcgagctgtggatctagtggaggag
gaatcgggcgcccctggggaggagcagcggcgctgggaggaggcccggctgggggcagcg
tccctgaagtttggggcccgagatgctgcctcccaggagcccaagtatcagctggtgctg
gaggaggaggaaaccatcgagtttgtccgggccactcaactccagggtgacgaggagccc
tcagctccatccccttcaacccaggctcagcagaaagagtccatccaggctgtccgccgc
agcctcccagtgttcccattccgagaggagctcctggcggccattgctaatcaccaagtc
ctcatcatcgaaggcgagaccggctcggggaagaccacccagatcccacagtatctcttt
gaggagggttacacgaggaagggtatgaagattgcctgtacccagccccggagagtggcg
gccatgagcgtggctgcccgagtggcccgggagatgggcgtgaagctcgggaatgaggtt
ggctacagcatccgctttgaggactgcacctcagagcgaaccgtcctgcgctacatgaca
gatgggatgcttctccgggagtttctgtctgagcctgaccttgcgagttacagcgtggtg
atggtggatgaggctcatgaacggaccctacacacagacattctctttggattgatcaag
gatgttgctcgcttccgacctgagctcaaggtcctggtggcttcagccacactggacact
gctcgcttttccaccttctttgatgacgcccctgtgtttcgaatccctgggcgcaggttt
ccagtggacatcttctatactaaggctccggaggctgactacctggaagcctgtgttgtg
tctgtgctgcagatccatgtaacccagccgcccggggatatcctggtgttcctgacagga
caggaggagattgaggctgcctgtgagatgctccaggatcgctgccgccgcctgggctcc
aagatccgggagctcctggtgctgcccatttatgccaacctgccctctgacatgcaggct
cgtatcttccagcccacgccccctggggcacgaaaggtggttgtggcaacgaacatcgcc
gagacatcgctcaccattgagggcatcatttacgtgctggatccagggttctgtaagcag
aagagctacaacccccgcacaggcatggaatcactcactgtcacaccctgcagcaaggcc
tcagccaatcagcgagctggccgggcaggtcgggtggctgcagggaagtgcttccgcctg
tatactgcctgggcctatcagcatgaactcgaggaaaccacggtgcctgagatccagagg
accagcctgggcaatgtcgtgttgctgctcaagagcttagggatccatgacctaatgcac
tttgatttcctggaccctcctccgtatgagaccctgctgctggctttggagcagctgtat
gctttgggagccctcaaccacctcggggagctcaccacgtctggtcgaaagatggcagag
ctgcccgtggaccccatgctgtctaaaatgatcttggcctctgagaagtacagctgttca
gaggagatcctgacagtggctgccatgctgtctgtcaacaactccatcttctaccgaccc
aaggacaaggttgtccatgctgacaatgctcgtgtcaacttcttcctccccggtggtgac
cacctggttctgctaaatgtctacacacagtgggctgagagtggttactcttcgcagtgg
tgctacgagaactttgtacagttcagatccatgcgccgagcccgggatgtgcgggaacag
ctggaggggctcttggaacgtgtggaagttggtctcagttcctgccagggggactacatc
cgcgtacgcaaggccatcactgctggttacttttaccacacagcacggctgactcgcagt
ggctaccgaacggtgaaacagcagcagacggtgttcattcatcccaactcctctctcttt
gagcaacagccacgctggctgctttaccacgaacttgtcttgaccaccaaagagttcatg
agacaggtattggagattgagagcagttggcttctggaggtggctccccactattataag
gccaaagagctagaagatcctcattctaagaaaatgccaaaaaaaataggcaagacacgg
gaagagctggggtga
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