Eulemur rufifrons (Bennett's brown lemur): 138397495
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Entry
138397495 CDS
T11398
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf04151
PI3K-Akt signaling pathway
eruf04510
Focal adhesion
eruf04512
ECM-receptor interaction
eruf04518
Integrin signaling
eruf04974
Protein digestion and absorption
eruf05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138397495 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138397495 (COL2A1)
04518 Integrin signaling
138397495 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138397495 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
138397495 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
138397495 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eruf00536
]
138397495 (COL2A1)
Glycosaminoglycan binding proteins [BR:
eruf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138397495 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
138397495
NCBI-ProteinID:
XP_069347692
LinkDB
All DBs
Position
16:complement(37486186..37515988)
Genome browser
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCQGQDVQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDVKDCLNPEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRAGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARG
LPGTPGIDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPAGRAGDPGLQGPAGPPGEKGEPG
DDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAG
PTGKQGDRGESGAQGPMGPSGPAGARGLPGPQGPRGDKGESGEPGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGTPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEAAGSLRQHDVEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPASVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEVAGNLKKALLIQGSNDVEIRAEGNSRFTYTTLKDGCTK
HTGKWDKTVIEYRTQKTSRLPIIDIAPMDIGGPEQEFGVDIGPACFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgttggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcagggccaggatgtccaggaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagatgtgaaagactgcctcaaccctgagatc
cccttcggagagtgctgccccatctgcccaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggcgatcgtggtgacaaa
ggtgaaaaaggtgctcccggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggtcctcccggccctcctggcccccctgggcttggtggaaactttgct
gcccagatggctggtggatttgatgagaaagctggtggtgcccagatgggagtgatgcaa
ggaccaatgggccccatgggacctcgaggacctccaggccctgctggtgctcctgggcct
caaggattccaaggcaatcctggtgaacctggtgaacctggcgtctctggtcctatgggt
ccccgtggtcctcctggcccccctggaaaacctggtgatgatggggaagctggaaaacct
ggaaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccaggcctagatggtgctaaggga
gaagctggtgccccaggtgtgaagggtgagagtggttcccctggcgagaacggttctccg
ggcccaatgggtccccgtggcctgcctggtgaaagaggacgagctggacctgccggtgct
gcgggtgcccgcggcaacgatggccagccaggccccgcaggacctccgggtcccgtcggt
cccgctggtggtcctggcttccctggtgctcccggagccaagggtgaagctggccccact
ggtgcccgtggtcctgaaggtgctcaaggtcctcgtggtgaacctggtactcctgggtcc
cctgggcctgctggtgcctctggaaaccctggaactgatggaattcctggagccaaagga
tctgctggtgctcctgggatcgctggtgctcctggtttccctggaccccgtggtcctcct
ggccctcaaggtgcaactggtcctctgggcccgaaaggtcagacgggtgaacctggcatt
gctggcttcaaaggtgaacaaggccctaagggagagcctggtcctgctggcccccaggga
gcccctggccctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggcggtgct
gggcccattggtccccccggagaaagaggtgctcctggcaaccgtggtttcccaggccag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggccttgctggt
cccaagggagccaatggtgaccctggccgtcccggagaacctggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggcccttctggagcc
cctggtgaagatggtcgccctggacctccaggtcctcagggggctcgtgggcagcccggt
gtcatgggtttccctggccccaaaggtgccaatggtgagcctggcaaagctggtgagaag
ggactgcccggtgctcctggtctgagaggtcttcctggcaaagatggtgagaccggtgct
gcaggaccccccggccccgctggacctgctggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcctggtgaagctggagcccccggcctcgtgggtcccaggggtgaa
cgaggcttcccaggtgaacgtggctctcccggtgcccagggcctccagggtgcccgtggc
ctccctggcactccaggcattgacggtcccaaaggtgcatctggcccagctggccccccc
ggggctcagggtcctccaggtcttcagggaatgcccggcgagaggggagcagctggcatc
gctgggcccaagggagacaggggtgatgttggtgagaaaggcccggaaggagcccccggg
aaggacggtggacgtggtctgactggtcccattgggccccccggcccggctggcgccaat
ggtgagaagggagaagttgggccccctggtcctgcgggaagtgctggtgctcgaggcgcc
ccgggtgaacgtggggagactgggccccccggcccagccggattcgccggccctcccggt
gctgacggccagcctggtgccaagggtgagcaaggagaggccggccagaagggtgacgct
ggtgctcctggtcctcagggtccctctggagctcctgggcctcagggtcctactggagtg
actggtcctaaaggagcccgtggtgcccaaggccccccgggagccaccggattccctgga
gctgctggccgcgttggacctcccggctccaatggcaaccctggacctcctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggccccgccggccga
gctggtgaccccggcctccaaggtcctgctgggccccctggcgagaagggagaacctgga
gatgatggtccctctggtgccgacggtcctccaggtccccagggtctggctggtcagaga
ggcattgttggtctgcctgggcagcgtggagagagaggattccccggcctgcctggccca
tcgggtgagcccggcaagcagggagcacctggcgcatctggagacagaggtcctcccggc
cccgtgggtcctcctggcctgactggccctgcaggtgaacctggacgagagggaagcccc
ggtgcagatggcccccctggcagagatggagcggctggagtcaagggcgatcgtggtgag
actggcgccgtgggtgctcccggagcccctgggccccctggctctcctggccctgctggc
ccgactggcaaacagggagacagaggagaatctggtgcacaaggccccatgggaccctca
ggaccagctggagcccggggactcccaggcccccaaggcccccgaggagacaaaggagag
tctggagagcctggcgagaggggcctgaagggacatcgtggcttcactggcctgcagggc
ctgcctggccctcctggtccttctggggaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcccggccctgttggtccctctggcaaagatggtgctaacggaatc
cctggccccatcgggcctcctggtccccgtggacgttcaggcgaaactggccctgctggt
cctcctgggactcccggaccccctggccctccaggtccccctggccctggcatcgacatg
tccgccttcgctggcctaggccagagagagaagggccctgaccccctgcagtacatgcgg
gctgacgaggcagctggctccctgagacaacatgacgttgaggtggatgccacgctcaag
tccctcaacaaccagatcgagagcatccgcagccccgagggctcccgcaagaaccctgca
cgcacctgccgggacctgaaactctgccaccctgagtggaagagcggagactactggatt
gaccccaaccagggctgcaccctggacgccatgaaggttttctgcaacatggagactggt
gagacctgcgtctaccccaaccctgcaagtgtgcccaagaagaactggtggagcagcaag
agcaaggagaagaaacacatctggtttggggagaccatcaacgggggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctgtccacggagggctcccagaacatcacctaccactgcaagaacagcattgcctacctg
gacgaagtagctggcaacctcaagaaggccctgctcatccagggctccaacgacgtagag
atccgggcagagggcaacagcaggttcacgtacaccaccctgaaggatggctgcacgaaa
cacaccggtaagtgggacaagactgttatcgagtaccggacacagaagacctcacgcctc
cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgtggac
atagggccagcctgcttcttgtaa
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integrated database retrieval system
