Eulemur rufifrons (Bennett's brown lemur): 138397893
Help
Entry
138397893 CDS
T11398
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eruf03021
]
138397893 (CHD1)
03036 Chromosome and associated proteins [BR:
eruf03036
]
138397893 (CHD1)
Transcription machinery [BR:
eruf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
138397893 (CHD1)
Chromosome and associated proteins [BR:
eruf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
138397893 (CHD1)
SLIK complex
138397893 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
138397893
NCBI-ProteinID:
XP_069348103
LinkDB
All DBs
Position
17:complement(68025707..68098762)
Genome browser
AA seq
1797 aa
AA seq
DB search
MNGHSDEESVRNSSRESSQSDDDSGSPSGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQHQASSNSG
SEEDSSSSEDSDDTSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEERDKSSCDETESDY
EPKNKVKSRKPPNRSKSKNGKKILGQKKRQIDSSEDDDDEEDYDNDKRSSRRQATVNISY
KEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGD
PNAGFEKNKEPGEVQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECS
WEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEALELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRKCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGPTF
RISGVQVNAKLVIAHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEA
QRLSGAGGSKRRKARAKKNKAMKSIKIKEEIKSDSSLPSDKSDEDDDKDEITSVKHPNKK
IKTERDSEEKPEPDVCIKKEPEEKREAKEKENKKELKREIKEKEDKKDIKEKDFKEKREN
KVKEAMQKEKDIKEEKLSESKSDSKERSKKSLMSDAPVHITASSEPVPISEESEELDQKT
FSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQ
WRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNSDQNSNLNAHVIRNADVERLKEN
TNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKNDSRKRPYSSFSNGKDHRDWDHHKQ
DSRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRSSSEYTHHK
SSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSVEHKSTPEHTWSSRKT
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaatagtagcagagaatcaagccagtcg
gatgacgattctgggtcaccctcaggctctggatctggttcaagttctgggagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatctgaatcaggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagtcctagtattctggccgttcaaagatctgca
atgctcaagaagcagcaacagcagcaacaacagcaacatcaagcttcatctaatagtgga
tcggaagaggattcctctagcagtgaagattctgatgatacatcaagtgaggtcaaaagg
aaaaagcataaagatgaagattggcaaatgtctgggtcaggatcaccatctcagtctggt
tcagattcagaatctgaagaacgagataaaagcagttgtgatgaaacggaatctgattat
gagccaaaaaacaaagtcaaaagcagaaaacctccaaatagatctaagtcaaaaaatgga
aagaagattcttggacaaaaaaagagacagattgattcatcggaggatgatgatgatgaa
gaggattatgataatgataaaagaagttctcgtcgccaagcaactgtcaatattagctat
aaggaagatgaagaaatgaaaacagattctgatgacctactggaagtctgtggagaggac
gttcctcaacctgaggaagaggaatttgaaacaatagaaaggtttatggattgtaggatt
gggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgac
ccaaatgcaggatttgaaaaaaacaaggaaccaggagaggtccagtatttaattaaatgg
aaaggatggtcgcatattcacaacacttgggaaactgaagaaacgcttaagcagcagaat
gttagaggaatgaaaaaattggataattataagaaaaaagatcaggaaacaaaaagatgg
ttgaaaaatgcttctccagaagatgtggagtattataattgccagcaagaacttacagat
gatctacataaacaatatcaaatagtggaacgtataattgctcattccaatcaaaagtca
gcagctggttatcctgattattattgcaaatggcagggccttccatactcagaatgtagc
tgggaagatggagctctcatttccaaaaagtttcaagcgtgcattgatgagtattttagc
aggaaccaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaagg
tttgtagctttgaagaagcagccatcctatattggaggacatgaggctttagaattaaga
gattatcaactaaatggtttaaattggcttgctcattcttggtgcaagggaaatagttgc
atacttgctgatgaaatgggccttggaaaaacaatacagacgatctcgtttctgaactat
ttgtttcatgaacatcaattatatggaccttttctattagtagtaccactctctactctc
acttcctggcaaagggagattcaaacatgggcttctcagatgaatgctgtggtttattta
ggtgacattaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaa
cgattaaaatttaatatattgttaacaacttatgaaatattattgaaggataaggcattc
cttggaggtctaaattgggcatttataggtgttgatgaagcacaccgattaaagaatgat
gactctcttctgtataagaccctaatagattttaaatccaatcaccgtctccttatcact
ggaactcctctacaaaactccctcaaagaactctggtctttgctgcatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatggcaaagggagagaatacggt
tatgcgagcctccacaaggagcttgagccgtttttgttacgccgagttaagaaagatgtg
gaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacag
aaacaatattacaaatggattttaactaggaattacaaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaattgattcttcttgacaagctgttaattcgcctaagagaa
cgaggcaatcgagtgcttattttttctcaaatggtgcggatgttagatatacttgcagaa
tatttgaaatatcgtcagtttccctttcaaagattagatggatcaataaaaggggaactg
aggaaacaagctctagatcattttaatgctgagggatcagaggatttctgctttttgctt
tccacaagagctggaggtctagggattaatttagcctctgccgacactgttgttatattt
gattctgattggaatccacagaatgatcttcaggcacaggctagagctcatagaattggg
caaaaaaagcaggtgaatatttatcgtctagttacaaagggttcagttgaagaagatatt
cttgaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggatact
actgggaagacagtgctacacacaggttctgccccatcaagttctactcctttcaataaa
gaagagttatcagccattttaaagtttggtgctgaggaactgtttaaggaacctgaagga
gaagaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcat
gaaaatgaaccaggtcctttaactgtaggagatgaattgctttcccagttcaaggttgct
aacttttcaaatatggatgaagatgacattgagttagaacctgaaagaaattcaaagaat
tgggaggaaatcattccagaagatcaaagaagacgattagaagaagaagagagacaaaaa
gaacttgaagaaatatatatgctcccaagaatgagaaagtgtgcaaagcagattagtttc
aacggaagtgaagggaggcgcagtagaagtaggagatattctggatccgatagtgattcg
atctcagaaaggaaaaggccaaagaaacggggaagaccacggaccatccctcgggagaat
attaaaggatttagtgatgcagaaattaggcggtttatcaagagctataagaaatttggt
ggccctctagaaagattagatgcaattgctcgagatgctgaattagttgataagtctgaa
acagaccttagacgactaggagaattggtacataatggttgtattaaagctttaaaggat
agttcttcaggaacagaacgaacaggtggtagactgggaaaagtaaagggtccaacattc
cgaatatcaggagtacaagtgaatgccaagctagtcatcgcccatgaagaagaattaata
cctttgcacaaatccattccttcagatccagaagaaagaaagcagtatactatcccatgt
catacaaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgtta
attggtatctatgaatatggatatggaagctgggaaatgattaaaatggatcctgacctc
agtctaacacacaagattcttccagacgatcctgataaaaagccacaagcaaaacagttg
cagacgcgtgcagactacctcatcaaattacttagtaaagatcttgcaagaaaagaagct
cagagactttctggtgcgggaggttcaaagaggagaaaagcaagagctaagaagaataaa
gcaatgaagtctataaaaataaaagaggaaataaagagtgattcttctctaccttcagat
aagtccgatgaagatgatgataaggatgaaatcacttctgtgaaacatccaaataaaaaa
attaaaacagaaagagacagtgaagaaaaacctgagccagatgtttgtataaagaaggaa
ccagaagaaaagagggaagcaaaagaaaaggagaataaaaaagaacttaaaagggagata
aaagaaaaagaggataagaaagatataaaggaaaaagattttaaagaaaaaagagaaaac
aaagtaaaagaagctatgcagaaagaaaaagacataaaggaagaaaagttgagcgaatct
aagtctgatagtaaagaaagatctaagaagtctttaatgtcagatgctccagttcatatc
actgcaagtagtgaaccagttcccatatctgaagaatctgaagagttggatcagaagaca
ttcagtatttgtaaagaaagaatgaggcctgtcaaagcagctttgaaacaacttgatagg
cctgagaaaggtctttcagaaagagaacaactagaacatactagacaatgtttaataaaa
attggagaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaattaagcag
tggagaaaaaacctgtggatttttgtatctaagtttactgagtttgatgcaagaaaatta
cataaattatataagcatgctattaaaaaacggcaggaatctcagcaaaacagtgatcag
aacagcaacttgaatgcccatgtgattagaaatgcagatgtggaaagattaaaagagaat
acaaatcatgatgatagcagcagggatagttattcctctgatagacacttatctcagtac
catgatcatcataaagaccgacatcagggagattcttacaaaaagaatgattccaggaaa
cgaccctattcttcttttagtaatggtaaagatcatcgtgattgggatcaccacaagcaa
gacagcagatactacagtgacagagaaaaacacagaaaactggatgatcacaggagtaga
gaccacaggtcaaatttggaaggaagtttaaaagatagatctcattctgatcatcgttct
cattcagatcatcggttacattcagaccaccggtcaagttctgaatatacacaccataaa
tcttccagggattataggtatcactcagattggcaaatggaccacagagcttccagtagt
ggccctaggtcaccactagatcagaggtctccttacggctccagatctccatttgaacat
tcagttgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
