Eulemur rufifrons (Bennett's brown lemur): 138397998
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Entry
138397998 CDS
T11398
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03015
mRNA surveillance pathway
eruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138397998
09123 Folding, sorting and degradation
03018 RNA degradation
138397998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eruf03019
]
138397998
03041 Spliceosome [BR:
eruf03041
]
138397998
Messenger RNA biogenesis [BR:
eruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138397998
mRNA cycle factors
Stress granule specific factors
138397998
Spliceosome [BR:
eruf03041
]
Complex C
Other components
Complex C specific factors
138397998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RBD_RDR6
RRM_3
RRM_occluded
TEX47
POP1_C
YflT
Motif
Other DBs
NCBI-GeneID:
138397998
NCBI-ProteinID:
XP_069348297
LinkDB
All DBs
Position
17:complement(14146454..14148370)
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AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVTTRRSLGYGYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDSKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLIDRKVFVGRFKSRKERE
AELGARAKEFTNVYVKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKRIYVGRAQKKVERQTELKRKFEQMKENRLTRYQGANLYVKN
LDDGIDDECLRKEFSPFGTITSAKVMMEGGHSKGFGFVCFSSPEEATKAVAEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVISPSQPAPPSDYFMAAIPQTQNRA
AYYPPNQISQLRPSPRWNAQGTRPHPFQNMPGAIRPAAPRPPFSTMKPASSQVPRVMSTQ
CVANTSIQTTGPHPAAAAAAATPAVRTVAQYKYAAGVRNPQQHLNAQPQVTMHQPAIHVQ
GQEPLTTSMLASAPPQEQKQMLGEQLFPLIQAMHPTLAHKITGMLLEIDNSELLHMLEST
ESLHFKVEEAVAVLQAHQAKEAAQKAVNSATGVPTL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcttcgctctacgtgggggacctacacccc
gacgtgaccgaggcgatgctctacgagaagttcagccctgctgggcccattctctccatc
cgggtttgcagggacgtgaccacccgccgctccttgggctacgggtatgtgaacttccag
cagccggcggacgccgagcgtgctctggacaccatgaattttgatgttataaagggcaag
ccagtacgcatcatgtggtctcagcgtgatccatcacttcacaaaagtggagtaggcaac
atattcattaaaaatttggacaaatccattgatagtaaagcactgtatgatacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggttccaagggctat
ggatttgtacactttgagacacaggaagcagctgaaagagctattgaaaaaatgaatggg
atgcttctaattgatcgcaaagtatttgttggacgatttaaatcccgaaaggaaagagaa
gcagaactcggagctagggcaaaggagttcaccaatgtttacgtcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagtttggccctgccttaagtgtg
aaagtaatgactgatgaaagtggaaaatccaaaggatttggatttgtaagctttgaaagg
catgaagatgcacagaaagctgtggatgagatgaatggaaaggagcttaatggaaaacgg
atatacgttggtcgagctcagaaaaaagtggaacggcagacagaactgaagcgcaaattt
gaacagatgaaggaaaataggctcaccagataccagggtgctaacctttatgtgaaaaat
cttgatgatggtattgatgatgaatgtctccggaaagagttttctccatttggtacaatc
actagtgcaaaggttatgatggaaggtggtcacagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttgcagaaatgaatggcagaattgtggccacc
aagccattgtatgtagctttagctcagcgcaaagaagagcgccaggctcacctcactaac
cagtatatgcagagaatggcaagtgtacgagctgtgcccaaccctgtaatcagcccctcc
cagccagcacctccttcagattacttcatggcagctattccacagactcagaaccgtgct
gcatactatcctcctaaccaaatttctcaactaaggccaagtcctcgctggaatgctcag
ggtaccagacctcatccattccaaaatatgcctggtgctattcgcccagctgctcctaga
ccaccatttagtactatgaaaccagcttcttctcaggttccacgagtcatgtcaacacaa
tgtgttgctaacacatcaatacagacaacgggtccacatcctgcagctgctgctgctgca
gctactcctgctgtccgcaccgttgcacagtacaaatatgctgcaggcgttcgtaatcct
caacaacatcttaatgcacagccacaagttaccatgcaccagcctgcaattcatgtacaa
ggtcaggaacctttgactacttccatgttggcatctgcccctcctcaagagcaaaagcaa
atgttgggtgaacagctgtttcctcttattcaagccatgcaccctactcttgctcacaaa
atcactggcatgttgttggagattgataattcagaacttcttcatatgcttgagtctact
gagtctctccattttaaggttgaggaagctgtggctgtactacaagcccaccaagctaaa
gaggctgcccagaaagcagttaacagtgccactggtgttccaactctttaa
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