Eulemur rufifrons (Bennett's brown lemur): 138400944
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Entry
138400944 CDS
T11398
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138400944 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eruf03019
]
138400944 (XAB2)
03041 Spliceosome [BR:
eruf03041
]
138400944 (XAB2)
Messenger RNA biogenesis [BR:
eruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138400944 (XAB2)
Spliceosome [BR:
eruf03041
]
Complex B
Other components
Prp19-related factors
138400944 (XAB2)
Complex C
138400944 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
138400944
NCBI-ProteinID:
XP_069352221
LinkDB
All DBs
Position
2:complement(12865084..12874168)
Genome browser
AA seq
855 aa
AA seq
DB search
MVVMARLSRAERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctctcgcgggccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctcggtcaaatgctggctccgc
tacatcgagttcaaacagggtgccccgaagcccaggctcaatcagctgtatgagcgggcg
cttaagctgctgccctgcagctacaaactctggtaccgctatctgaaggcacggcgggca
caggtgaagcatcgctgtgtgactgaccctgcctatgaagatgtcaacaactgccacgag
agagcctttgtgttcatgcacaagatgccccgtctatggttggattattgccagttcctg
atggaccaggggcgtgtcacacacacccgccgtaccttcgaccgtgccctccgggcactg
cccatcacgcagcactctcgcatctggcccttgtacctgcgcttcctgcgctcacaccca
ctgcccgagacagccgtgcgaggctaccggcgcttcctcaagctgagccccgagagtgca
gaggagtacattgagtacctcaagtcgagcgacaggctggatgaggccgcacagcgcctg
gccaccgtggtgaacgatgagcgcttcgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctatgtgacctcatctcccagaacccggacaaagtgcagtccctcaatgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctggggaagctctggtgc
tcgctggctgactactacatccgcagtggccacttcgagaaggctcgggacgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgttcgacagctacgcc
cagttcgaggagagcatgattgccgctaagatggagactgcctcggagctggggcgcgag
gaggaggatgatgtggacctggagctgcgcctggcccgctttgagcagctcatcagccgg
aggcctcttctcctcaacagcgtcttgctgcgccagaacccgcaccacgtgcatgagtgg
cacaagcgcgtggccctgcaccagggccggccccgggagatcatcaacacatacacggag
gctgtgcagacagtagaccccttcaaggccacaggcaagccccacacactatgggtcgcg
tttgccaagttctatgaggacaacgggcagctggatgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggacgacctggccagtgtgtggtgccagtgcggg
gagctggagctccgacacgagaactacgacgaggctttgcggctgctgcggaaggccacg
gcactgcccgcccgccgggccgagtacttcgacggctcggagcccgtgcagaaccgcgtg
tataagtccctgaaggtgtggtcgatgctcgccgacctggaggagagcctcggcaccttc
cagtccaccaaggccgtgtacgaccgtatcctggacctgcgcattgccacaccccagatt
gtcatcaactatgccatgttcctggaggagcacaagtactttgaagagagcttcaaggcg
tacgagcgcggcatctcgctgtttaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaaattcatcgcccgctatgggggccgcaaactggagcgggcgcgggacctcttc
gagcaggcgctggacggctgccctcccaaatacgccaagaccctgtacctgctgtacgcg
cagctggaggaggaatggggcctggcccggcacgccatggctgtgtatgagcgggccacc
agggctgtggaacctgcccagcagtacgacatgttcaacatctacatcaagcgggcagct
gagatctacggagtcacccacacccgtggcatctaccagaaggccatcgaggtgctgtcg
gacgagcacgcccgagagatgtgtctgcggttcgcggacatggagtgcaagctcggggag
attgaccgcgcccgggccatctacagcttctgctcccagatctgcgacccccggacaaca
ggcgcgttctggcagacgtggaaggacttcgaggtccggcatggcaacgaggacaccatc
aaggagatgctgcgcattcgccgcagcgtgcaggccacgtacaacacgcaagtcaacttc
atggcttcgcagatgctcaaggtgtcgggcagtgccacaggcaccgtgtccgacctggcc
ccagggcagagcggcatggacgacatgaagctgctggagcagcgggcggagcagctggcg
gctgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagc
gacgcgtcccgggaggagctggcggagctggcgcagcaggtcaaccccgaggagatccag
ctgggcgaggacgaggacgaggacgagatggacctggagcccaacgaggtccggctggag
cagcagagcgtgccggccgcggtgttcgggagcctgaaggaagactga
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