Eulemur rufifrons (Bennett's brown lemur): 138401217
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Entry
138401217 CDS
T11398
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf04140
Autophagy - animal
eruf04148
Efferocytosis
eruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138401217 (VPS16)
04148 Efferocytosis
138401217 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138401217 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eruf04131
]
138401217 (VPS16)
Membrane trafficking [BR:
eruf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138401217 (VPS16)
Hops complex
138401217 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
138401217
NCBI-ProteinID:
XP_069352684
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All DBs
Position
20:27817653..27838287
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AA seq
839 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCQDRVAQILLAVGPDLYLLDHAACSTVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSFLVPELDGVRIFSRSIHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgctcggggactctgccttttaccggaaatat
gaactgtacagcatggactgggacctgaaggaggaactcagggactgcctggtggctgct
gcaccctatgggggtcccattgcgctgctgaggaacccctggcggaaggagaaagctgcc
agtgtgcggccagtgctcgatatatactctgcttctggcatgcctctggccagcctgctg
tggaaaagtgggcctgtggtgtccctgggctggtcagctgaggaggagctgctctgtgtg
caggaagacggtgcagtactggtttatgggcttcatggtgacttccggagacacttcagc
atgggcaatgaggtactccagaaccgggttttggacgcccggatcttccacaccgagttc
ggctctggggtggccatcctcacaggggctcaccgctttaccctcagtgccaacgtgggt
gacctcaaacttcgccggatgccagaggtgccaggtctgcaaagtgcaccttcatgctgg
accacactgtgccaggaccgagtggcacagattcttctggccgtggggcccgatctttac
ctcctggaccatgcagcctgctccacagtgacaccccctggcctggccccaggagtgagc
agcttcctacagatggctgtctccttcacctaccgacacctggcgctcttcacagacaca
ggctacatctggatggggacagcatcactcaaggagaagctgtgtgaattcaattgcaac
atccgggcacctccaaagcagatggtctggtgcagccgtcctcgcagcaaggaaagggct
gttgtggtggcctgggagaggcggctaatggtggtgggtgacgcgcctgagagcatccag
tttgtgctggacgaggactccttcctggtgcccgagctcgacggggtccgcatcttctcc
cgcagcatccatgagttcttacacgaggttccagtggccagtgaggagatcttcaaaatt
gcctcaatggcccccggagcactgctgttggaggcccagaaggagtatgagaaagagagc
cagaaggcggatgagtacctgcgggagatccaggagctggggcagctgacccaggccgtg
cagcagtgcatcgaggcagcgggacacgagcaccagccagacatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttcctcgacagatttccacccgacagcttcgtgcgc
atgtgtcaggacctgcgtgtgctcaatgccgttcgggactatcacattgggatccccctc
acctatagccaatataagcagctcaccatccaggtgctgctggacaggcttgtgttacgg
aggctttaccctctggccatccagatatgcgagtacctgcgccttcctgaggtacagggt
gtcagcaggatcctggcccattgggcctgctacaaggtgcaacagaaggatgtatcagat
gaggatgttgctcgagccattaaccagaagctgggagacacgcctggcgtctcttactcc
gacattgctgcacgggcctatggctgtggccgcacggagctggccatcaagctgctggag
tatgagccacgctcaggggagcaggtaccccttctcctaaagatgaagaggagcaagctg
gcactgagcaaggccatcgagagtggggacactgacctggtgttcacggtgttgctgcac
ctgaagaacgagctgaaccgaggagattttttcatgacgcttcggaaccagcccatggct
ctgagcttgtaccgacagttctgtaagcatcaggagctggagacactgaaggacctttac
aatcaggatgacaatcaccaggagttgggcagcttccacatccgagccagctatgctgcg
gaagagcgtatcgaggggcgagtagcagctctacagacagccgctgatgccttttacaag
gccaagaatgagtttgcagccaaggccacagaggaccaaatgcggctcctgcggctgcag
cggcgcctagaagatgagctagggggccagttcctagacctgtctctacatgacacagtc
accaccctcatcctcggcggtcacaacaagcgtgcagagcagctggcgcgtgacttccgc
atccctgacaagaggctctggtggctgaagctgactgccctggcagatttggaagactgg
gaggagctagagaagttttccaagagcaagaagtcacccatcggctacttgccttttgtg
gagatctgcatgaaacaacacaacaaatatgaggccaagaagtatgcttcccgagtgggt
cccgagcagaaggtcaaggctttgcttctcgttggggatgtggctcaggctgcagacgtc
gccatcgagcaccggaacgaggctgagctgagcctcgtattgtcccactgtactggagcc
acagatggagccacggctgacaagattcaacgggccagggcacaagcccagaagaagtga
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