Escherichia ruysiae: OSH18_00235
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Entry
OSH18_00235 CDS
T09019
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
eruy
Escherichia ruysiae
Pathway
eruy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OSH18_00235 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eruy03400
]
OSH18_00235 (alkA)
Enzymes [BR:
eruy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OSH18_00235 (alkA)
DNA repair and recombination proteins [BR:
eruy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OSH18_00235 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WGM52654
LinkDB
All DBs
Position
47138..47986
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AA seq
282 aa
AA seq
DB search
MYTLNWQPPYDWSWMLGFLAVRAVSGVETVTDNYYARSLAVGEHRGVIKAVPDVETNTLQ
VNVSSGLEAVATECLAKMSRLFDLQCNPQIVNGALGELGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTAKVAQLYGERLDDFPEYVCFPTPQRLAAADPMALKGLGMTLKRAE
ALIHLANAALDGSLPMKMPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPEEV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttcttgcc
gtccgtgcggtgagtggcgtagaaacagtcacggacaattattatgcccgtagtctggcg
gtgggcgaacatcgcggcgtgataaaggcggttcctgatgtcgaaactaatacgttgcaa
gtgaatgtaagttcgggattagaagcggtagcgaccgagtgcctggcgaaaatgagccgc
ctgtttgatctgcaatgtaatccgcagattgttaacggtgcattgggcgagttaggcgct
gcgcggccagggctacgtctgcccgggagtgttgatgcttttgagcagggcgtgcgcgcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgactgccaaagtggcgcag
ctttatggcgaacggctggatgatttccctgaatatgtctgctttcccaccccccaacga
ctggcagcagccgacccgatggcactaaaagggttggggatgacgttgaaacgggcagag
gcgctgattcatttagccaatgcggcactggatggctccttgccgatgaaaatgccgggc
gacgttgagcaagcgatgaaaacgctgcaaacatttcctggaattgggcgctggacggcg
aattatttcgccttgcgtggctggcaagcgaaagatgttttcctgccggatgattatttg
attaaacagcgatttccaggaatgacgccggcacaaatccgccgttatgccgaacgctgg
aaaccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagaa
gaagtatga
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