Escherichia ruysiae: OSH18_01765
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Entry
OSH18_01765 CDS
T09019
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eruy
Escherichia ruysiae
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eruy03016
]
OSH18_01765
Enzymes [BR:
eruy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
OSH18_01765
Transfer RNA biogenesis [BR:
eruy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OSH18_01765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
OSR1_C
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
WGM52920
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All DBs
Position
complement(343742..345676)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLTH
EFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLVREDLTALDFVTIDSASTEDMDDALFARALPDDKLQLIVAIADPTAWIAEGSK
LDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDDIEF
FAATIESKAKLVYDQVSDWLENTGDWQPESDAIAEQIRLLAQICQRRGEWRNNHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFD
PANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETATRPQDEITVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKITDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccc
cgcgctgaaggggtggtaaaagccactgaaaaaggctttggcttcctggaagtcgacgca
cagaaaagttatttcattccgcctccgcagatgaaaaaagtcatgcatggcgaccgaatt
atcgcggtgatccacagtgaaaaagaacgtgaatccgcagagccagaagaactggttgaa
ccgtttctgactcgttttgtggggaaagttcagggcaaaaatgaccgtctggccatcgtt
cctgatcatccactcttaaaagacgccattccttgtcgcgcggctcgtggcctgacccat
gagtttaaagaaggcgactgggcggttgccgaaatgcgccgccatccgttgaaaggcgat
cgctcattctatgcggaactgacacaatacatcacttttggtgacgaccatttcgtgccg
tggtgggtaaccctggcacgccataatctggaaaaagaagcgccagacggtgtcgctacc
gaaatgctcgatgaaggtctggtacgtgaagacctgactgcactggactttgtcaccatt
gacagcgccagcacggaagatatggatgatgccctcttcgccagggcgctgccggatgac
aaactacagttgattgtggcgattgccgacccaaccgcgtggatcgcagaaggcagcaag
ctggacaaagccgcgaaaattcgtgcgttcaccaactatctgccaggcttcaatatccca
atgcttccacgggaactttccgacgatctctgctccctgcgtgccaatgaagtgcgtccg
gtgctggcatgtcggatgacgctatctgctgacggcaccattgaagacgacatcgaattt
tttgctgccaccatcgaatccaaagcgaaactggtttatgaccaggtttccgattggctg
gaaaacaccggtgactggcaaccagaaagtgatgcgattgcggaacaaatccgcctgtta
gcgcaaatttgccagcgtcgcggcgaatggcgtaataaccatgcgttggtgtttaaagat
cgcccggattaccgttttattctgggtgaaaaaggtgaagtgttggatatcgtcgctgaa
ccgcgtcgtattgccaaccgtatcgtcgaagaagcgatgatcgccgccaacatatgtgcg
gctcgcgtgctgcgcgataagctcggtttcggtatctataacgtgcatatgggctttgat
ccggcaaatgccgacgcgctggcagcattactgaaaacgcacggcctacatgttgacgcc
gaagaagtgctcacactggacggcttctgcaaactgcgccgtgagctggatgcgcaaccg
acaggtttccttgacagccgcattcgccgttttcagtcttttgcagaaatcagcaccgaa
cctggccctcactttggtctcggtctggaagcgtatgccacctggacttcaccgattcgt
aagtatggcgacatgatcaaccatcgtctgctgaaagcgatcatcaaaggcgaaacagcg
acgcgtccacaggatgagatcaccgtccaaatggcagagcgtcgccgcctcaaccgaatg
gcagaacgtgatgtcggcgactggttatacgcacgtttcctgaaagataaagccggaacc
gatacccgttttgcggcggaaatcgtcgatatcagccgtggcggtatgcgtgtgcggctg
gtcgataacggcgcaatcgcctttatccctgcaccattcttacacgccgtgcgcgatgaa
ctggtttgcagtcaggaaaacggcaccgtacaaattaaaggtgaaacggtttacaagata
accgacgttatcgacgtcaccatcgcagaagtacgcatggaaacccgtagtattattgcg
cgcccggtcgcgtaa
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